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Rugolon, Franco
Publications (3 of 3) Show all publications
Rugolon, F., Randl, K. R., Bampa, M. & Papapetrou, P. (2025). A Workflow for Creating Multimodal Machine Learning Models for Metastasis Predictions in Melanoma Patients. In: Rosa Meo; Fabrizio Silvestri (Ed.), Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV. Paper presented at International Workshops of ECML PKDD 2023, 18-22 September 2023, Turin, Italy. (pp. 87-102). Springer Nature
Open this publication in new window or tab >>A Workflow for Creating Multimodal Machine Learning Models for Metastasis Predictions in Melanoma Patients
2025 (English)In: Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV / [ed] Rosa Meo; Fabrizio Silvestri, Springer Nature , 2025, p. 87-102Conference paper, Published paper (Refereed)
Abstract [en]

Melanoma is the most common form of skin cancer, responsible for thousands of deaths annually. Novel therapies have been developed, but metastases are still a common problem, increasing the mortality rate and decreasing the quality of life of those who experience them. As traditional machine learning models for metastasis prediction have been limited to the use of a single modality, in this study we aim to explore and compare different unimodal and multimodal machine learning models to predict the onset of metastasis in melanoma patients to help clinicians focus their attention on patients at a higher risk of developing metastasis, increasing the likelihood of an earlier diagnosis.

We use a patient cohort derived from an Electronic Health Record, and we consider various modalities of data, including static, time series, and clinical text. We formulate the problem and propose a multimodal ML workflow for predicting the onset of metastasis in melanoma patients. We evaluate the performance of the workflow based on various classification metrics and statistical significance. The experimental findings suggest that multimodal models outperform the unimodal ones, demonstrating the potential of multimodal ML to predict the onset of metastasis.

Place, publisher, year, edition, pages
Springer Nature, 2025
Series
Communications in Computer and Information Science (CCIS), ISSN 1865-0929, E-ISSN 1865-0937 ; 2136
Keywords
Multimodal predictions, Machine learning, Melanoma, Metastasis, EHR
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-237873 (URN)10.1007/978-3-031-74640-6_7 (DOI)2-s2.0-85215966676 (Scopus ID)978-3-031-74640-6 (ISBN)978-3-031-74639-0 (ISBN)
Conference
International Workshops of ECML PKDD 2023, 18-22 September 2023, Turin, Italy.
Available from: 2025-01-14 Created: 2025-01-14 Last updated: 2025-02-25Bibliographically approved
Mondrejevski, L., Rugolon, F., Miliou, I. & Papapetrou, P. (2024). MASICU: A Multimodal Attention-based classifier for Sepsis mortality prediction in the ICU. In: 2024 IEEE 37th International Symposium on Computer-Based Medical Systems (CBMS): . Paper presented at 2024 IEEE 37th International Symposium on Computer-Based Medical Systems (CBMS), 26-28 June 20204, Guadalajara, Mexico. (pp. 326-331). IEEE (Institute of Electrical and Electronics Engineers)
Open this publication in new window or tab >>MASICU: A Multimodal Attention-based classifier for Sepsis mortality prediction in the ICU
2024 (English)In: 2024 IEEE 37th International Symposium on Computer-Based Medical Systems (CBMS), IEEE (Institute of Electrical and Electronics Engineers) , 2024, p. 326-331Conference paper, Published paper (Refereed)
Abstract [en]

Sepsis poses a significant threat to public health, causing millions of deaths annually. While treatable with timely intervention, accurately identifying at-risk patients remains challenging due to the condition’s complexity. Traditional scoring systems have been utilized, but their effectiveness has waned over time. Recognizing the need for comprehensive assessment, we introduce MASICU, a novel machine learning model architecture tailored for predicting ICU sepsis mortality. MASICU is a novel multimodal, attention-based classification model that integrates interpretability within an ICU setting. Our model incorporates multiple modalities and multimodal fusion strategies and prioritizes interpretability through different attention mechanisms. By leveraging both static and temporal features, MASICU offers a holistic view of the patient’s clinical status, enhancing predictive accuracy while providing clinically relevant insights.

Place, publisher, year, edition, pages
IEEE (Institute of Electrical and Electronics Engineers), 2024
Series
IEEE International Symposium on Computer-Based Medical Systems, ISSN 2372-918X, E-ISSN 2372-9198
Keywords
Head, Attention mechanisms, Accuracy, Computer architecture, Predictive models, Sepsis, Magnetic heads, Multimodal, Attention, ICU, Mortality Prediction
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-233746 (URN)10.1109/CBMS61543.2024.00061 (DOI)001284700700024 ()2-s2.0-85200517080 (Scopus ID)979-8-3503-8472-7 (ISBN)
Conference
2024 IEEE 37th International Symposium on Computer-Based Medical Systems (CBMS), 26-28 June 20204, Guadalajara, Mexico.
Available from: 2024-09-24 Created: 2024-09-24 Last updated: 2024-09-26Bibliographically approved
Rugolon, F., Bampa, M. & Papapetrou, P. (2023). A Workflow for Generating Patient Counterfactuals in Lung Transplant Recipients. In: Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana, Konstantinos Sechidis, Arif Canakoglu, Sara Pido, Pietro Pinoli, Albert Bifet, Sepideh Pashami (Ed.), Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2022, Grenoble, France, September 19–23, 2022, Proceedings, Part II. Paper presented at Machine Learning and Principles and Practice of Knowledge Discovery in Databases, nternational Workshops of ECML PKDD 2022, Grenoble, France, September 19–23, 2022. (pp. 291-306). Springer Nature
Open this publication in new window or tab >>A Workflow for Generating Patient Counterfactuals in Lung Transplant Recipients
2023 (English)In: Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2022, Grenoble, France, September 19–23, 2022, Proceedings, Part II / [ed] Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana, Konstantinos Sechidis, Arif Canakoglu, Sara Pido, Pietro Pinoli, Albert Bifet, Sepideh Pashami, Springer Nature , 2023, p. 291-306Conference paper, Published paper (Refereed)
Abstract [en]

Lung transplantation is a critical procedure performed in end-stage pulmonary patients. The number of lung transplantations performed in the USA in the last decade has been rising, but the survival rate is still lower than that of other solid organ transplantations. First, this study aims to employ machine learning models to predict patient survival after lung transplantation. Additionally, the aim is to generate counterfactual explanations based on these predictions to help clinicians and patients understand the changes needed to increase the probability of survival after the transplantation and better comply with normative requirements. We use data derived from the UNOS database, particularly the lung transplantations performed in the USA between 2019 and 2021. We formulate the problem and define two data representations, with the first being a representation that describes only the lung recipients and the second the recipients and donors. We propose an explainable ML workflow for predicting patient survival after lung transplantation. We evaluate the workflow based on various performance metrics, using five classification models and two counterfactual generation methods. Finally, we demonstrate the potential of explainable ML for resource allocation, predicting patient mortality, and generating explainable predictions for lung transplantation.

Place, publisher, year, edition, pages
Springer Nature, 2023
Series
Communications in Computer and Information Science, ISSN 1865-0929, E-ISSN 1865-0937 ; 1753
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-232091 (URN)10.1007/978-3-031-23633-4_20 (DOI)000967761200020 ()2-s2.0-85149952714 (Scopus ID)978-3-031-23632-7 (ISBN)978-3-031-23633-4 (ISBN)
Conference
Machine Learning and Principles and Practice of Knowledge Discovery in Databases, nternational Workshops of ECML PKDD 2022, Grenoble, France, September 19–23, 2022.
Available from: 2024-07-24 Created: 2024-07-24 Last updated: 2024-07-29Bibliographically approved
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