Inbreeding depression and genetic rescue are central themes in conservation biology. Translocation is a tool to assist genetic rescue but is connected to risks. A new study by Quinn et al. used genomic data to evaluate translocations as a potential action in montane red fox, bringing important implications also for other threatened species.

Diseases and parasites are important drivers of population dynamics in wild mammal populations. Small and endangered populations that overlap with larger, reservoir populations are particularly vulnerable to diseases and parasites, especially in ecosystems highly influenced by climate change. Sarcoptic mange, caused by a parasitic mite Sarcoptes scabiei, constitutes a severe threat to many wildlife populations and is today considered a panzootic. The Scandinavian arctic fox Vulpes lagopus is endangered with a fragmented distribution and is threatened by e.g. red fox Vulpes vulpes expansion, prey scarcity and inbreeding depression. Moreover, one of the subpopulations in Scandinavia has suffered from repeated outbreaks of sarcoptic mange during the past decade, most likely spread by red foxes. This was first documented in 2013 and then again 2014, 2017, 2019, 2020 and 2021. We used field inventories and wildlife cameras to follow the development of sarcoptic mange outbreaks in this arctic fox subpopulation with specific focus on disease transmission and consequences for reproductive output. In 2013–2014, we documented visual symptoms of sarcoptic mange in about 30% of the total population. Despite medical treatment, we demonstrate demographic consequences where the number of arctic fox litters plateaued and litter size was reduced after the introduction of S. scabiei. Furthermore, we found indications that mange likely was transmitted by a few arctic foxes travelling between several dens, i.e. ‘super-spreaders'. This study highlights sarcoptic mange as a severe threat to small populations and can put the persistence of the entire Scandinavian arctic fox population at risk.

Garbage may cause substantial environmental perturbations, in part because of its consumption by wildlife. Such consumption may have direct health implications for animals and may also influence trophic relationships. Even in pristine Arctic ecosystems, wildlife feeding in marine environments consume garbage in the form of plastic debris transported by ocean currents. We show that Arctic wildlife in pristine terrestrial environments may also ingest garbage or food items derived from abandoned camp sites. We found the remains of a chocolate wrapper and a milk powder bag in two Arctic fox (Vulpes lagopus) scats and a piece of cloth in an Arctic wolf (Canis lupus arctos) scat collected near Nares Strait, northern Greenland, one of the most pristine terrestrial wilderness regions on Earth. Found on Washington Land and associated with long-abandoned camp sites, these three scats were among 657 Arctic fox scats and 92 wolf scats collected as part of a larger study. Our study demonstrates that these two highly opportunistic predators managed to consume garbage despite the almost complete lack of human activity in this High-Arctic region. Our results highlight that abandoned anthropogenic material in the High Arctic may function as a source of garbage for local terrestrial wildlife over extended time periods, and that garbage consumption may become a potential issue if human activity in remote Arctic regions increases.

Expansion of boreal species into tundra ecosystems is a consequence of climate change and human exploitation that threatens local species through increased predation, competition, and pathogen transmission. Under these circumstances, efficient control of expanding boreal species may be necessary, but the efficiency of such action depends on understanding the ecological influences of expansion. The red fox (Vulpes vulpes) is expanding into the tundra across the Arctic. In Scandinavia, red foxes threaten local tundra species and communities including the endangered Arctic fox (V. lagopus). The ecological dynamics in the tundra are influenced by small rodent cycles (classified into different phases based on seasonal abundance fluctuations), which can affect red fox expansion, distribution, and abundance. We used a 17-year (2004–2020) dataset from the tundra in Sweden, consisting of raw snow track data, to test how cyclic prey influenced red fox distribution and abundance, and subsequently red fox control. The winter abundance of red fox was influenced by small rodent phase, with higher abundance during high prey availability (i.e., increased number of prey numbers) with no support for a time lag between red fox and small rodent abundance. This suggests that high prey availability attracts red foxes to the tundra and that higher immigration from the boreal zone can be expected in response to increased prey abundances. There was no relationship between red fox control and small rodent availability, but control was influenced by red fox abundance during the previous year, which highlights an opportunistic control strategy. We recommend an adaptive management strategy where authorities include small rodent dynamics in the planning and execution of red fox control.

Aim: Mountains are often used to study how environmental factors influence biodiversity. However, we have limited understanding of the processes causing biodiversity variation in mountains and whether such processes vary across trophic levels and spatial scales. The aim of this study was to evaluate (i) whether community assembly processes varied along elevational gradients, (ii) whether there were differences in such variation between primary producers (vascular plants) and secondary consumers (spiders) and (iii) whether there were scale dependencies in any elevational variation in community assembly. Location: Fennoscandia, Northern Sweden. Taxon: Vascular plants, spiders. Methods: We used phenotypic and phylogenetic dispersion to quantify how elevation influenced community assembly of vascular plants and spiders and whether there were any scale dependencies in such influences. Our original data of plant and spider communities came from our own field surveys, phenotypic dispersion was calculated based on matrices of ecological traits, and phylogenetic dispersion was calculated from phylogenetic trees for each organism group. Trait matrices were based on a combination of literature values and our own measurements. The phylogeny for vascular plants was based on a published plant super-tree, whereas the phylogeny for spiders was created by ourselves based on the DNA sequences at the mitochondrial cytochrome c oxidase subunit 1 (COI). Results: Plants were environmentally filtered throughout all elevations and scales, but the importance of convergent evolution increased with elevation. For spiders, the importance of environmental filtering as well as niche conservatism increased with elevation. For both groups, communities at smaller scales were more influenced by biotic regulation and niche conservatism than at larger scales. Main Conclusions: Our study highlights both taxonomic differences and scale dependencies in how elevation influences community assembly. We argue that these results can have broad ramifications for our understanding of how spatial variation in biodiversity is generated and maintained. This may have particular relevance for our ability to predict the ecological consequences of climate change. Our results further highlight that high elevation specialists may suffer increased risks of climate driven extinctions due to a combination of increased competition and increased fragmentation of suitable habitats. Particularly for spiders, which had high elevation specialists clustered along specific lineages, such extinctions could lead to significant loss of phylogenetic variation.

Predation is an important ecological process that can significantly impact the maintenance of ecosystem services. In arctic environments, the relative ecological importance of predation is thought to be increasing due to climate change, partly because of increased productivity with rising temperatures. Therefore, understanding predator–prey interactions in arctic ecosystems is vital for the sustainable management of these northern regions. Network theory provides a framework for quantifying the structures of ecological interactions. In this study, we use dietary observations on mammalian and avian predators in a high arctic region, including isolated peninsulas on Ellesmere Island and north Greenland, to construct bipartite trophic networks. We quantify the complexity, specialization, and nested as well as modular structures of these networks and also determine if these properties varied among the peninsulas. Mammal prey remains were the dominant diet item for all predators, but there was spatial variation in diet composition among peninsulas. The predator–prey networks were less complex, had more specialized interactions, and were more nested and more modular than random expectations. However, the networks displayed only moderate levels of modularity. Predator species had less specialized interactions with prey than prey had with predators. All network properties differed among the peninsulas, which highlights that ecosystems often show complex responses to environmental characteristics. We suggest that gaining knowledge about spatial variation in the characteristics of predator–prey interactions can enhance our ability to manage ecosystems exposed to environmental perturbations, particularly in high arctic environments subject to rapid environmental change. 

Inbreeding depression has been documented in various fitness traits in a wide range of species and taxa, however, the mutational basis is not yet well understood. We investigate how putatively deleterious variation influences fitness and is shaped by individual ancestry by re-sequencing complete genomes of 37 individuals in a natural arctic fox (Vulpes lagopus) population subjected to both inbreeding depression and genetic rescue. We find that individuals with high proportion of homozygous loss of function genotypes (LoFs), which are predicted to exert a strong effect on fitness, generally have lower lifetime reproductive success and live shorter lives compared with individuals with lower proportion of LoFs. We also find that juvenile survival is negatively associated with the proportion of homozygous missense genotypes and positively associated with genome wide heterozygosity. Our results demonstrate that homozygosity of strongly and moderately deleterious mutations can be an important cause of trait specific inbreeding depression in wild populations, and mark an important step towards making more informed decisions using applied conservation genetics.

Inbreeding depression has been documented in various fitness traits in a wide range of species and taxa, however, the mutational basis is not yet well understood. We investigate how putatively deleterious variation influences fitness and is shaped by individual ancestry by re-sequencing complete genomes of 37 individuals in a natural arctic fox (Vulpes lagopus) population subjected to both inbreeding depression and genetic rescue. We find that individuals with high proportion of homozygous loss of function genotypes (LoFs), which are predicted to exert a strong effect on fitness, generally have lower lifetime reproductive success and live shorter lives compared with individuals with lower proportion of LoFs. We also find that juvenile survival is negatively associated with the proportion of homozygous missense genotypes and positively associated with genome wide heterozygosity. Our results demonstrate that homozygosity of strongly and moderately deleterious mutations can be an important cause of trait specific inbreeding depression in wild populations, and mark an important step towards making more informed decisions using applied conservation genetics.

A genomic database of all Earth’s eukaryotic species could contribute to many scientific discoveries; however, only a tiny fraction of species have genomic information available. In 2018, scientists across the world united under the Earth BioGenome Project (EBP), aiming to produce a database of high-quality reference genomes containing all ~1.5 million recognized eukaryotic species. As the European node of the EBP, the European Reference Genome Atlas (ERGA) sought to implement a new decentralised, equitable and inclusive model for producing reference genomes. For this, ERGA launched a Pilot Project establishing the first distributed reference genome production infrastructure and testing it on 98 eukaryotic species from 33 European countries. Here we outline the infrastructure and explore its effectiveness for scaling high-quality reference genome production, whilst considering equity and inclusion. The outcomes and lessons learned provide a solid foundation for ERGA while offering key learnings to other transnational, national genomic resource projects and the EBP.

Translocations are a widespread approach to conserve threatened populations. Given the rapid decline and genetic deterioration of many natural populations, translocations are expected to become even more common in the future. The success of translocations is, however, dependent on multiple context-dependent factors, such as demographic and genetic status, habitat quality and animal behaviour. The Scandinavian arctic fox (Vulpes lagopus) exists in a small, fragmented population that is demographically vulnerable and exposed to inbreeding depression. In the early 2000 s, releases of arctic foxes from the Norwegian Captive Breeding Programme were initiated with the purpose of reintroducing populations to formerly inhabited areas and promoting connectivity. Since 2008/2009, 61 foxes have been released in Junkeren, Norway to re-establish an unoccupied area. We used a combination of field observations and microsatellite genotyping from the release site and two neighbouring subpopulations to investigate (i) the probability of establishment and reproduction for released foxes at the release site and in neighbouring subpopulations, and (ii) the impact on litter size and genetic composition in the recipient populations. Results showed that 18% of the released foxes were established at the release site, or in neighbouring subpopulations and 11.5% reproduced successfully. The extent of post-release dispersal into neighbouring subpopulations was also relatively high (11.5%). During the study period, the number of litters more than doubled in the subpopulations with released foxes contributing 29.5% to this increase, but no clear effect of immigration on litter size was found. There was a slight increase in genetic variation in one of the subpopulations, and a significant decline in genetic divergence between subpopulations. We conclude that despite extensive releases, demographic and genetic effects were highly context-dependent. This study highlights the challenges of reinforcement programmes in small populations and reintroductions to unoccupied sites, especially for highly mobile species in a fragmented landscape.