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Khalifa, Shaden A. M.
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Publications (10 of 77) Show all publications
El-Seedi, H. R., Abo-Atya, D. M., Khalifa, S., Zhang, T. & Popović-Djordjević, J. (2025). Truffle Industry: An Overview. In: Kandikere Sridhar; Sunil Deshmukh (Ed.), Truffles: Diversity, Ecology and Biotechnology (pp. 68-110). Boca Raton: CRC Press
Open this publication in new window or tab >>Truffle Industry: An Overview
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2025 (English)In: Truffles: Diversity, Ecology and Biotechnology / [ed] Kandikere Sridhar; Sunil Deshmukh, Boca Raton: CRC Press, 2025, p. 68-110Chapter in book (Refereed)
Abstract [en]

Due to their chemical composition, nutritional quality, and health benefits, mushrooms have held a special place in many cultures since ancient times. Truffles, in particular, are noted for their unique characteristics (Wang and Marcone, 2011; Rosa-Gruszecka et al., 2017; Lee et al., 2020). Truffles are one of the oldest types of food. According to some documents, the first culinary use of truffles by people settled on the eastern coast of the Mediterranean Sea dates back to the Bronze Age (Rosa-Gruszecka et al., 2017). Due to their distinct aroma and delicious taste, they are very attractive to consumers (Wang and Marcone, 2011; Khalifa et al., 2019).

Place, publisher, year, edition, pages
Boca Raton: CRC Press, 2025
Series
Progress in Mycological Research
National Category
Food Science
Identifiers
urn:nbn:se:su:diva-239807 (URN)10.1201/9781003505921-5 (DOI)2-s2.0-85217551769 (Scopus ID)978-1-032-81992-1 (ISBN)978-1-032-82735-3 (ISBN)978-1-003-50592-1 (ISBN)
Available from: 2025-02-26 Created: 2025-02-26 Last updated: 2025-02-26Bibliographically approved
El-Seedi, H. R., Ibrahim, H. M. S., Yosri, N., Ibrahim, M. A. A., Hegazy, M.-E. F., Setzer, W. N., . . . Khalifa, S. A. M. (2024). Naturally Occurring Xanthones; Biological Activities, Chemical Profiles and In Silico Drug Discovery. Current Medicinal Chemistry, 31(1), 62-101
Open this publication in new window or tab >>Naturally Occurring Xanthones; Biological Activities, Chemical Profiles and In Silico Drug Discovery
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2024 (English)In: Current Medicinal Chemistry, ISSN 0929-8673, E-ISSN 1875-533X, Vol. 31, no 1, p. 62-101Article, review/survey (Refereed) Published
Abstract [en]

Xanthones are widely distributed polyphenols, present commonly in higher plants; Garcinia, Calophyllum, Hypericum, Platonia, Mangifera, Gentiana and Swertia. Xanthone tricyclic scaffold is able to interact with different biological targets, showing antibacterial and cytotoxic effects, as well as potent effects against osteoarthritis, malaria, and cardiovascular diseases. Thus, in this article we focused on pharmacological effects, applications and preclinical studies with the recent updates of xanthon & PRIME;s isolated compounds from 2017-2020. We found that only a-mangostin, gambogic acid, and mangiferin, have been subjected to preclinical studies with particular emphasis on the development of anticancer, diabetes, antimicrobial and hepatoprotective therapeutics. Molecular docking calculations were performed to predict the binding affinities of xanthone-derived compounds against SARS-CoV-2 M-pro. According to the results, cratoxanthone E and morellic acid demonstrated promising binding affinities towards SARS-CoV-2 M-pro with docking scores of -11.2 and -11.0 kcal/mol, respectively. Binding features manifested the capability of cratoxanthone E and morellic acid to exhibit nine and five hydrogen bonds, respectively, with the key amino acids of the M-pro active site. In conclusion, cratoxanthone E and morellic acid are promising anti-COVID-19 drug candidates that warrant further detailed in vivo experimental estimation and clinical assessment.

Keywords
Xanthones, cardiovascular protective, phase II clinical trial, biological activity, SARS-CoV-2 main proteas, molecular docking
National Category
Infectious Medicine
Identifiers
urn:nbn:se:su:diva-222246 (URN)10.2174/0929867330666230221111941 (DOI)001067103100005 ()36809956 (PubMedID)2-s2.0-85175118959 (Scopus ID)
Available from: 2023-10-11 Created: 2023-10-11 Last updated: 2024-10-14Bibliographically approved
Jin, L., Fu, J., Lin, X., Jin, L., Guo, Y., Liu, X., . . . Shou, Q. (2024). Saprophytic fungus (Ganoderma sessile) restrained Treg recruitment in the tumor microenvironment by down-regulating CCL28/CCR10 pathway. Journal of Functional Foods, 123, Article ID 106573.
Open this publication in new window or tab >>Saprophytic fungus (Ganoderma sessile) restrained Treg recruitment in the tumor microenvironment by down-regulating CCL28/CCR10 pathway
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2024 (English)In: Journal of Functional Foods, ISSN 1756-4646, E-ISSN 2214-9414, Vol. 123, article id 106573Article in journal (Refereed) Published
Abstract [en]

Ganoderma sessile, a saprophytic fungus, is a traditional Chinese medicinal material used in Chinese folk medicine and cuisine for its potential to enhance cancer patients immunity in clinical practice. However, the underlying mechanisms of its therapeutic effects remain elusive. Therefore, we explored the edible value to determine the underlying mechanisms of GS through multiple breast cancer models. GS was found to suppress tumor growth and lung metastasis, and prolong survival after surgery. It significantly increased tumor-infiltrating CD44HiCD62LHiCD8+ TCM cells while decreasing CD4+CD25+CD127− Treg cells in both lymph nodes and tumors. The mechanism behind GS's effects primarily involved modulation of the Hif1-a/CCL28 pathway associated with Treg recruitment. Furthermore, GS could reduce CCR10 levels on the surface of Tregs. Collectively, GS inhibits tumor growth and pulmonary metastasis by restraining Treg recruitment through downregulation of the CCL28/CCR10 pathway—a finding which highlights its potential as a natural anti-tumor immune agent warranting further exploration.

Keywords
Anti-tumor activity, CCL28/CCR10, Ganoderma sessile Murrill, Hif1-α, Regulatory T cells, β-catenin
National Category
Environmental Sciences
Identifiers
urn:nbn:se:su:diva-240818 (URN)10.1016/j.jff.2024.106573 (DOI)001357405000001 ()2-s2.0-85208764521 (Scopus ID)
Available from: 2025-03-20 Created: 2025-03-20 Last updated: 2025-03-20Bibliographically approved
Yosri, N., Alsharif, S. M., Xiao, J., Musharraf, S. G., Zhao, C., Saeed, A., . . . El-Seedi, H. R. (2023). Arctium lappa (Burdock): Insights from ethnopharmacology potential, chemical constituents, clinical studies, pharmacological utility and nanomedicine. Biomedicine and Pharmacotherapy, 158, Article ID 114104.
Open this publication in new window or tab >>Arctium lappa (Burdock): Insights from ethnopharmacology potential, chemical constituents, clinical studies, pharmacological utility and nanomedicine
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2023 (English)In: Biomedicine and Pharmacotherapy, ISSN 0753-3322, E-ISSN 1950-6007, Vol. 158, article id 114104Article, review/survey (Refereed) Published
Abstract [en]

Arctium lappa L. is a medicinal edible homologous plant, commonly known as burdock or bardana, which belongs to the Asteraceae family. It is widely distributed throughout Northern Asia, Europe, and North America and has been utilized for hundreds of years. The roots, fruits, seeds, and leaves of A. lappa have been extensively used in traditional Chinese Medicine (TCM). A. lappa has attracted a great deal of attention due to its possession of highly recognized bioactive metabolites with significant therapeutic potential. Numerous pharmacological effects have been demonstrated in vitro and in vivo by A. lappa and its bioactive metabolites, including antimicrobial, anti-obesity, antioxidant, anticancer, anti-inflammatory, anti-diabetic, anti-allergic, antiviral, gastroprotective, hepatoprotective, and neuroprotective activities. Additionally, A. lappa has demonstrated considerable clinical efficacies and valuable applications in nanomedicine. Collectively, this review covers the properties of A. lappa and its bioactive metabolites, ethnopharmacology aspects, pharmacological effects, clinical trials, and applications in the field of nanomedicine. Hence, a significant attention should be paid to clinical trials and industrial applications of this plant with particular emphasis, on drug discovery and nanotechnology.

Keywords
Folk medicine, Bioactive constituents, Preclinical trials, Clinical trials, Nanomedicine
National Category
Pharmacology and Toxicology
Identifiers
urn:nbn:se:su:diva-214533 (URN)10.1016/j.biopha.2022.114104 (DOI)000904418300007 ()36516694 (PubMedID)2-s2.0-85143852139 (Scopus ID)
Available from: 2023-02-10 Created: 2023-02-10 Last updated: 2023-02-10Bibliographically approved
Philip, A. K., Samuel, B. A., Bhatia, S., Khalifa, S. A. M. & El-Seedi, H. R. (2023). Artificial Intelligence and Precision Medicine: A New Frontier for the Treatment of Brain Tumors. Life, 13(1), Article ID 24.
Open this publication in new window or tab >>Artificial Intelligence and Precision Medicine: A New Frontier for the Treatment of Brain Tumors
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2023 (English)In: Life, E-ISSN 2075-1729, Vol. 13, no 1, article id 24Article, review/survey (Refereed) Published
Abstract [en]

Brain tumors are a widespread and serious neurological phenomenon that can be life- threatening. The computing field has allowed for the development of artificial intelligence (AI), which can mimic the neural network of the human brain. One use of this technology has been to help researchers capture hidden, high-dimensional images of brain tumors. These images can provide new insights into the nature of brain tumors and help to improve treatment options. AI and precision medicine (PM) are converging to revolutionize healthcare. AI has the potential to improve cancer imaging interpretation in several ways, including more accurate tumor genotyping, more precise delineation of tumor volume, and better prediction of clinical outcomes. AI-assisted brain surgery can be an effective and safe option for treating brain tumors. This review discusses various AI and PM techniques that can be used in brain tumor treatment. These new techniques for the treatment of brain tumors, i.e., genomic profiling, microRNA panels, quantitative imaging, and radiomics, hold great promise for the future. However, there are challenges that must be overcome for these technologies to reach their full potential and improve healthcare.

Keywords
precision medicine, brain tumors, artificial intelligence, imaging technology, gene targeting, patient care
National Category
Biological Sciences
Identifiers
urn:nbn:se:su:diva-214873 (URN)10.3390/life13010024 (DOI)000917631800001 ()36675973 (PubMedID)2-s2.0-85146657424 (Scopus ID)
Available from: 2023-02-21 Created: 2023-02-21 Last updated: 2023-02-21Bibliographically approved
Fayed, M. A. A., Bakr, R. O., Yosri, N., Khalifa, S. A. M., El-Seedi, H. R., Hamdan, D. I. & Refaey, M. S. (2023). Chemical profiling and cytotoxic potential of the n-butanol fraction of Tamarix nilotica flowers. BMC Complementary Medicine and Therapies, 23, Article ID 169.
Open this publication in new window or tab >>Chemical profiling and cytotoxic potential of the n-butanol fraction of Tamarix nilotica flowers
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2023 (English)In: BMC Complementary Medicine and Therapies, E-ISSN 2662-7671, Vol. 23, article id 169Article in journal (Refereed) Published
Abstract [en]

Background Cancer represents one of the biggest healthcare issues confronting humans and one of the big challenges for scientists in trials to dig into our nature for new remedies or to develop old ones with fewer side effects. Halophytes are widely distributed worldwide in areas of harsh conditions in dunes, and inland deserts, where, to cope with those conditions they synthesize important secondary metabolites highly valued in the medical field. Several Tamarix species are halophytic including T.nilotica which is native to Egypt, with a long history in its tradition, found in its papyri and in folk medicine to treat various ailments.

Methods LC–LTQ–MS–MS analysis and 1H-NMR were used to identify the main phytoconstituents in the n- butanol fraction of T.nilotica flowers. The extract was tested  in vitro for its cytotoxic effect against breast (MCF-7) and liver cell carcinoma (Huh-7) using SRB assay.

Results T.nilotica n-butanol fraction of the flowers was found to be rich in phenolic content, where, LC–LTQ–MS–MS allowed the tentative identification of thirty-nine metabolites, based on the exact mass, the observed spectra fragmentation patterns, and the literature data, varying between tannins, phenolic acids, and flavonoids. 1H-NMR confirmed the classes tentatively identified. The in-vitro evaluation of the n-butanol fraction showed lower activity on MCF-7 cell lines with IC50 > 100 µg/mL, while the higher promising effect was against Huh-7 cell lines with an IC50= 37 µg/mL.

Conclusion Our study suggested that T.nilotica flowers' n-butanol fraction is representing a promising cytotoxic candidate against liver cell carcinoma having potential phytoconstituents with variable targets and signaling pathways.

Keywords
Tamarix nilotica flowers, LC-LTQ-MS-MS, H-1-NMR, Cytotoxicity, MCF-7, Huh-7
National Category
Pharmacology and Toxicology
Identifiers
urn:nbn:se:su:diva-220582 (URN)10.1186/s12906-023-03989-8 (DOI)000994272600002 ()37226153 (PubMedID)2-s2.0-85160184957 (Scopus ID)
Available from: 2023-08-31 Created: 2023-08-31 Last updated: 2025-01-31Bibliographically approved
Darwish, A. M. G., Abd El-Wahed, A. A., Shehata, M. G., El-Seedi, H. R., Masry, S. H. D., Khalifa, S. A. M., . . . El-Sohaimy, S. A. (2023). Chemical Profiling and Nutritional Evaluation of Bee Pollen, Bee Bread, and Royal Jelly and Their Role in Functional Fermented Dairy Products. Molecules, 28(1), Article ID 227.
Open this publication in new window or tab >>Chemical Profiling and Nutritional Evaluation of Bee Pollen, Bee Bread, and Royal Jelly and Their Role in Functional Fermented Dairy Products
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2023 (English)In: Molecules, ISSN 1431-5157, E-ISSN 1420-3049, Vol. 28, no 1, article id 227Article in journal (Refereed) Published
Abstract [en]

Honeybee products, as multicomponent substances, have been a focus of great interest. The present work aimed to perform the nutritional and chemical profiling and biochemical characterization of bee pollen (BP), bee bread (BB), and royal jelly (RJ) and study their applications in the fortification of functional fermented dairy products. Their effects on starter cultures and the physicochemical and sensorial quality of products were monitored. A molecular networking analysis identified a total of 46 compounds in the three bee products that could be potential medicines, including flavonoids, fatty acids, and peptides. BB showed the highest protein and sugar contents (22.57 and 26.78 g/100 g), which cover 45.14 and 53.56% of their daily values (DVs), with considerable amounts of the essential amino acids threonine and lysine (59.50 and 42.03%). BP, BB, and RJ can be considered sources of iron, as 100 g can cover 141, 198.5, and 94.94% of DV%, respectively. BP was revealed to have the highest phenolic and flavonoid contents (105.68 and 43.91 µg/g) and showed a synergetic effect when mixed with RJ, resulting in increased antioxidant activity, while BB showed a synergetic effect when mixed with RJ in terms of both antioxidant and proteolytic powers (IC50 7.54, 11.55, 12.15, 12.50, and 12.65 cP compared to the control (10.55 cP)), reflecting their organoleptic properties and highlighting these health-oriented products as promising natural products for human health care.

Keywords
honeybee products, amino acid profile, chemical profiling, international molecular network GNPS database, antioxidant potentials, proteolytic activity, fortified fermented milk
National Category
Biological Sciences Food Science
Identifiers
urn:nbn:se:su:diva-214510 (URN)10.3390/molecules28010227 (DOI)000908977400001 ()36615421 (PubMedID)2-s2.0-85145707052 (Scopus ID)
Available from: 2023-02-06 Created: 2023-02-06 Last updated: 2023-08-28Bibliographically approved
Khan, F.-A., Yaqoob, S., Ali, S., Tanveer, N., Wang, Y., Ashraf, S., . . . El-Seedi, H. R. (2023). Designing Functionally Substituted Pyridine-Carbohydrazides for Potent Antibacterial and Devouring Antifungal Effect on Multidrug Resistant (MDR) Strains. Molecules, 28(1), Article ID 212.
Open this publication in new window or tab >>Designing Functionally Substituted Pyridine-Carbohydrazides for Potent Antibacterial and Devouring Antifungal Effect on Multidrug Resistant (MDR) Strains
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2023 (English)In: Molecules, ISSN 1431-5157, E-ISSN 1420-3049, Vol. 28, no 1, article id 212Article in journal (Refereed) Published
Abstract [en]

The emergence of multidrug-resistant (MDR) pathogens and the gradual depletion of available antibiotics have exacerbated the need for novel antimicrobial agents with minimal toxicity. Herein, we report functionally substituted pyridine carbohydrazide with remarkable antimicrobial effect on multi-drug resistant strains. In the series, compound 6 had potent activity against four MDR strains of Candida spp., with minimum inhibitory concentration (MIC) values being in the range of 16–24 µg/mL and percentage inhibition up to 92.57%, which was exceptional when compared to broad-spectrum antifungal drug fluconazole (MIC = 20 µg/mL, 81.88% inhibition). Substitution of the octyl chain in 6 with a shorter butyl chain resulted in a significant anti-bacterial effect of 4 against Pseudomonas aeruginosa (ATCC 27853), the MIC value being 2-fold superior to the standard combination of ampicillin/cloxacillin. Time-kill kinetics assays were used to discern the efficacy and pharmacodynamics of the potent compounds. Further, hemolysis tests confirmed that both compounds had better safety profiles than the standard drugs. Besides, molecular docking simulations were used to further explore their mode of interaction with target proteins. Overall results suggest that these compounds have the potential to become promising antimicrobial drugs against MDR strains.

Keywords
multidrug resistance, MDR strains, antibiotics resistance, antimicrobial, pyridine
National Category
Pharmaceutical Sciences
Identifiers
urn:nbn:se:su:diva-214507 (URN)10.3390/molecules28010212 (DOI)000908487900001 ()36615406 (PubMedID)2-s2.0-85145700153 (Scopus ID)
Available from: 2023-02-06 Created: 2023-02-06 Last updated: 2023-08-28Bibliographically approved
Ullah, H., Di Minno, A., Di Filippis, A., Sommella, E., Buccato, D. G., De Lellis, L. F., . . . Daglia, M. (2023). In Vitro Antimicrobial and Antibiofilm Properties and Bioaccessibility after Oral Digestion of Chemically Characterized Extracts Obtained from Cistus × incanus L., Scutellaria lateriflora L., and Their Combination. Foods, 12(9), Article ID 1826.
Open this publication in new window or tab >>In Vitro Antimicrobial and Antibiofilm Properties and Bioaccessibility after Oral Digestion of Chemically Characterized Extracts Obtained from Cistus × incanus L., Scutellaria lateriflora L., and Their Combination
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2023 (English)In: Foods, E-ISSN 2304-8158, Vol. 12, no 9, article id 1826Article in journal (Refereed) Published
Abstract [en]

Periodontal diseases are oral inflammatory diseases ranging from gingivitis to chronic periodontitis. Porphyromonas gingivalis is one of the major pathogens responsible for severe and chronic periodontitis. Plant extracts with antimicrobial activity could be considered possible alternatives to chlorhexidine, an antiseptic substance used in oral hygiene thatcan cause bacteria resistance. Here, two commercial extracts obtained from Cistus × incanus L. and Scutellaria lateriflora L. were chemically characterized usingUltra-High-Performance Liquid Chromatography (UHPLC) coupled with a Q-Exactive Hybrid Quadrupole Orbitrap Mass Spectrometer. The extracts were studied for their bioaccessibility after simulated in vitro oral digestion, their antimicrobial activity against P. gingivalis, their protective effects against cellular invasion by P. gingivalis, and their antibiofilm activity. The extracts were found to contain very complex mixtures of polyphenols, which were quite stable after in vitro simulated oral digestion and demonstrated mild, dose-dependent inhibitory activity against P. gingivalis growth. This activity increased with the combination of the two extracts. Moreover, the combination of the extracts induced a reduction in P. gingivalis HaCaT invasiveness, and the reduction in biofilm came to around 80%. In conclusion, a combination of C. incanus and S. lateriflora showed promising effects useful in the treatment of gingivitis.

Keywords
Cistus x incanus L., Scutellaria lateriflora L., oral health, gingivitis, Porphyromonas gingivalis
National Category
Pharmacology and Toxicology
Identifiers
urn:nbn:se:su:diva-220584 (URN)10.3390/foods12091826 (DOI)000987202900001 ()37174364 (PubMedID)2-s2.0-85159153712 (Scopus ID)
Available from: 2023-09-01 Created: 2023-09-01 Last updated: 2023-09-01Bibliographically approved
Amin, F. A., Cheng, M. Z., Sabri, S., Ismail, N., Chan, K. W., Esa, N. M., . . . Zawawi, N. (2023). In Vivo Toxicity Assessment of the Probiotic Bacillus amyloliquefaciens HTI-19 Isolated from Stingless Bee (Heterotrigona itama) Honey. Nutrients, 15(10), Article ID 2390.
Open this publication in new window or tab >>In Vivo Toxicity Assessment of the Probiotic Bacillus amyloliquefaciens HTI-19 Isolated from Stingless Bee (Heterotrigona itama) Honey
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2023 (English)In: Nutrients, E-ISSN 2072-6643, Vol. 15, no 10, article id 2390Article in journal (Refereed) Published
Abstract [en]

This study evaluated the acute and sub-acute toxicity of B. amyloliquefaciens HTI-19 (isolated from stingless bee honey) in female Sprague Dawley rats. In an acute toxicity study, the rats received a low dosage (1 x 109 CFU center dot mL 1), medium dosage (3 x 10(9) CFU center dot mL(-1)), or high dosage (1 x 10(10) CFU center dot mL(-1)) of B. amyloliquefaciens HTI-19 daily orally by syringe-feeding for 14 days. For the subacute toxicity study, rats received a low dosage (1 x 10(9) CFU center dot mL(-1)) or a high dosage (1 x 10(10) CFU center dot mL(-1)) for 28 days. The probiotic feeding in acute and sub-acute toxicity studies showed no mortality or significant abnormalities in rats throughout the experimental period. In week 2 of the acute study, the body weight of the rats showed a significant increase (p < 0.05) compared to the control. By gross and microscopic examination of organs, no evidently significant changes were observed in the morphology of organs. Serum biochemical tests and blood hematology tests also revealed no treatment-related changes. Overall, these data indicated that oral administration of B. amyloliquefaciens HTI-19 up to 1 x 10(9) CFU center dot mL(-1) for 28 days can be considered safe.

Keywords
functional foods, probiotic safety, Sprague Dawley rat
National Category
Public Health, Global Health and Social Medicine
Identifiers
urn:nbn:se:su:diva-230258 (URN)10.3390/nu15102390 (DOI)000998153400001 ()37242273 (PubMedID)2-s2.0-85160360283 (Scopus ID)
Available from: 2024-06-10 Created: 2024-06-10 Last updated: 2025-02-20Bibliographically approved
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