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Dalerum, F., Cipollone, M., Cordischi, F., Di Croce, A., Ferri, D., Giovannini, S., . . . Meloro, C. (2024). Effects of phylogenetic associations on environmental and temporal niche partitioning among sympatric mammals. Basic and Applied Ecology, 74, 98-107
Open this publication in new window or tab >>Effects of phylogenetic associations on environmental and temporal niche partitioning among sympatric mammals
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2024 (English)In: Basic and Applied Ecology, ISSN 1439-1791, E-ISSN 1618-0089, Vol. 74, p. 98-107Article in journal (Refereed) Published
Abstract [en]

Mammals have evolved to occupy spatial and temporal niches in order to optimize resource utilization and minimize predation risk or competition. Subsequently, niche partitioning may be influenced by phylogenetic associations, which could have substantial consequences for ecosystem structure and function. We use the output from occupancy models based on camera trapping data to construct a tri-partite network describing the environmental and temporal partitioning of activity among twelve sympatric mammals in the Apennine Mountains of central Italy. We further evaluate if there were any effects of phylogenetic associations on the contributions of species to the properties of this spatio-temporal network. The Apennines form a pristine region in central Italy with a relatively intact Mediterranean mammal fauna. The mammal community in our study consisted of species ranging in size from 300 gs to over 200 kg, and included herbivores, omnivores and predators. There was limited structuring of the network describing environmental and temporal niche use. Furthermore, we did not find any phylogenetic signal in species contributions to network structures, and phylogenetic relatedness among species was not associated with their similarities in environmental or spatial niche use. However, animals appeared to have partitioned environmental niches more than temporal ones, suggesting that spatial variation in resource availability may have been more important than temporal avoidance of predation risk or competition in shaping activity within this mammal community. Our study highlights the need to evaluate under which conditions evolutionary history is influencing contemporary ecological processes.

Keywords
Niche use, Diel activity, Habitat use, Species co-existence, Graph theory, Networks, Camera trapping, Occupancy models, Mammal community, Species interactions
National Category
Ecology
Identifiers
urn:nbn:se:su:diva-226639 (URN)10.1016/j.baae.2023.12.002 (DOI)001154897200001 ()2-s2.0-85184722189 (Scopus ID)
Available from: 2024-02-15 Created: 2024-02-15 Last updated: 2024-11-14Bibliographically approved
Lacy, H., De Cuyper, A., Dalerum, F., Tosoni, E., Clauss, M., Ciucci, P. & Meloro, C. (2024). Estimating body condition of Apennine brown bears using subjective scoring based on camera trap photographs. Mammal Research, 69(3), 355-364
Open this publication in new window or tab >>Estimating body condition of Apennine brown bears using subjective scoring based on camera trap photographs
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2024 (English)In: Mammal Research, ISSN 2199-2401, E-ISSN 2199-241X, Vol. 69, no 3, p. 355-364Article in journal (Refereed) Published
Abstract [en]

The assessment of animal body condition has important practical and management implications for endangered wildlife populations. The nutritional condition of a population can be evaluated in a non-invasive way using photogrammetry techniques, avoiding direct manipulation. This study evaluates the utility of using body condition scoring (BCS) based on the visual assessment of subcutaneous fat and muscle from the body contour as a non-invasive method to quantify body condition in free ranging bears from camera trap photographs. Photographs of Apennine brown bears (Ursus arctos marsicanus), taken between 2007 and 2009 in the Abruzzo, Lazio and Molise National Park (PNALM, Italy), were used to evaluate the potential of this technique. BCS assessment was performed on 754 photographs representing 71 independent observations. Forty-eight of these photographs were selected to also score quantitative body ratios using a standardised measure of torso height. BCS varied seasonally, as expected by food availability and brown bear nutritional physiology, and it was also positively correlated to all three body ratios. Our findings indicate that BCS assessment is a good proxy for body condition, and that camera trap data can be effectively used to assess and monitor the nutritional condition of bear populations, such as the critically endangered one in central Italy.

Keywords
Biometry, Body condition score, Brown bear, Camera traps, Central apennine
National Category
Zoology
Identifiers
urn:nbn:se:su:diva-238572 (URN)10.1007/s13364-024-00755-0 (DOI)2-s2.0-85198143685 (Scopus ID)
Available from: 2025-01-28 Created: 2025-01-28 Last updated: 2025-01-28Bibliographically approved
Angerbjörn, A., Lidén, K., Roth, J. D. & Dalerum, F. (2024). Evaluating the use of marine subsidies by Arctic foxes without direct coastal access; insights from stable isotopes. Polar Biology, 47(9), 935-944
Open this publication in new window or tab >>Evaluating the use of marine subsidies by Arctic foxes without direct coastal access; insights from stable isotopes
2024 (English)In: Polar Biology, ISSN 0722-4060, E-ISSN 1432-2056, Vol. 47, no 9, p. 935-944Article in journal (Refereed) Published
Abstract [en]

The trophic structures of tundra ecosystems are often viewed as a result of local terrestrial primary productivity. However, other resources can be brought in through long-distant migrants or be directly accessible in coastal areas. Hence, trophic structures may deviate from predictions based on local terrestrial resources. The Arctic fox (Vulpes lagopus) is a small canid that may use marine resources when available. We used stable isotope values in Arctic fox fur and literature data on potential prey to evaluate Arctic fox summer resource use in a mountain tundra without coastal access. The dietary contribution of local prey, presumably mostly rodents, declined with declining rodent abundance, with a subsequent increased contribution of migratory prey relying on marine resources. Stable isotope values did not differ between this terrestrial area and an area with direct coastal access during years of high rodent abundance, but isotope values during low rodent abundances suggested less marine input than in a coastal population feeding primarily on marine prey. Our study shows that marine resources may be used by animals in areas without any coastal access, and we highlight that such partial coupling of ecosystems must be included in the modeling and assessments of tundra environments.

Keywords
Delta 13C, Delta 15N, Allochthonous resources, Predator-prey relations, Fennoscandia, Ecological subsidies
National Category
Zoology Ecology
Identifiers
urn:nbn:se:su:diva-231610 (URN)10.1007/s00300-024-03256-7 (DOI)001226894000001 ()2-s2.0-85193376352 (Scopus ID)
Available from: 2024-08-07 Created: 2024-08-07 Last updated: 2024-09-05Bibliographically approved
Gort-Esteve, A., Abrham, M., Carøe, C., Måsviken, J., Freire, S., Lecomte, N., . . . Dalerum, F. (2024). Garbage consumption by Arctic terrestrial predators in one of the most pristine land areas on Earth. Polar Research, 43, Article ID 9756.
Open this publication in new window or tab >>Garbage consumption by Arctic terrestrial predators in one of the most pristine land areas on Earth
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2024 (English)In: Polar Research, ISSN 0800-0395, E-ISSN 1751-8369, Vol. 43, article id 9756Article in journal (Refereed) Published
Abstract [en]

Garbage may cause substantial environmental perturbations, in part because of its consumption by wildlife. Such consumption may have direct health implications for animals and may also influence trophic relationships. Even in pristine Arctic ecosystems, wildlife feeding in marine environments consume garbage in the form of plastic debris transported by ocean currents. We show that Arctic wildlife in pristine terrestrial environments may also ingest garbage or food items derived from abandoned camp sites. We found the remains of a chocolate wrapper and a milk powder bag in two Arctic fox (Vulpes lagopus) scats and a piece of cloth in an Arctic wolf (Canis lupus arctos) scat collected near Nares Strait, northern Greenland, one of the most pristine terrestrial wilderness regions on Earth. Found on Washington Land and associated with long-abandoned camp sites, these three scats were among 657 Arctic fox scats and 92 wolf scats collected as part of a larger study. Our study demonstrates that these two highly opportunistic predators managed to consume garbage despite the almost complete lack of human activity in this High-Arctic region. Our results highlight that abandoned anthropogenic material in the High Arctic may function as a source of garbage for local terrestrial wildlife over extended time periods, and that garbage consumption may become a potential issue if human activity in remote Arctic regions increases.

Keywords
Arctic fox, Arctic wolf, Canada, Greenland, Litter, terrestrial
National Category
Ecology
Identifiers
urn:nbn:se:su:diva-236617 (URN)10.33265/polar.v43.9756 (DOI)001342545800001 ()2-s2.0-85182695039 (Scopus ID)
Available from: 2024-12-03 Created: 2024-12-03 Last updated: 2024-12-03Bibliographically approved
Måsviken, J., Dalén, L., Norén, K. & Dalerum, F. (2024). Processes regulating local community assembly of plants and spiders in high latitude mountains. Journal of Biogeography, 51(11), 2184-2197
Open this publication in new window or tab >>Processes regulating local community assembly of plants and spiders in high latitude mountains
2024 (English)In: Journal of Biogeography, ISSN 0305-0270, E-ISSN 1365-2699, Vol. 51, no 11, p. 2184-2197Article in journal (Refereed) Published
Abstract [en]

Aim: Mountains are often used to study how environmental factors influence biodiversity. However, we have limited understanding of the processes causing biodiversity variation in mountains and whether such processes vary across trophic levels and spatial scales. The aim of this study was to evaluate (i) whether community assembly processes varied along elevational gradients, (ii) whether there were differences in such variation between primary producers (vascular plants) and secondary consumers (spiders) and (iii) whether there were scale dependencies in any elevational variation in community assembly. Location: Fennoscandia, Northern Sweden. Taxon: Vascular plants, spiders. Methods: We used phenotypic and phylogenetic dispersion to quantify how elevation influenced community assembly of vascular plants and spiders and whether there were any scale dependencies in such influences. Our original data of plant and spider communities came from our own field surveys, phenotypic dispersion was calculated based on matrices of ecological traits, and phylogenetic dispersion was calculated from phylogenetic trees for each organism group. Trait matrices were based on a combination of literature values and our own measurements. The phylogeny for vascular plants was based on a published plant super-tree, whereas the phylogeny for spiders was created by ourselves based on the DNA sequences at the mitochondrial cytochrome c oxidase subunit 1 (COI). Results: Plants were environmentally filtered throughout all elevations and scales, but the importance of convergent evolution increased with elevation. For spiders, the importance of environmental filtering as well as niche conservatism increased with elevation. For both groups, communities at smaller scales were more influenced by biotic regulation and niche conservatism than at larger scales. Main Conclusions: Our study highlights both taxonomic differences and scale dependencies in how elevation influences community assembly. We argue that these results can have broad ramifications for our understanding of how spatial variation in biodiversity is generated and maintained. This may have particular relevance for our ability to predict the ecological consequences of climate change. Our results further highlight that high elevation specialists may suffer increased risks of climate driven extinctions due to a combination of increased competition and increased fragmentation of suitable habitats. Particularly for spiders, which had high elevation specialists clustered along specific lineages, such extinctions could lead to significant loss of phylogenetic variation.

Keywords
arthropods, biodiversity, community ecology, elevational gradient, mountain ecology, species composition, species richness, vascular plants
National Category
Ecology Zoology
Identifiers
urn:nbn:se:su:diva-237167 (URN)10.1111/jbi.14981 (DOI)001269049400001 ()2-s2.0-85198725867 (Scopus ID)
Available from: 2025-01-07 Created: 2025-01-07 Last updated: 2025-01-07Bibliographically approved
Abrham, M., Norén, K., Filella, J. B., Angerbjörn, A., Lecomte, N., Pečnerová, P., . . . Dalerum, F. (2024). Properties of vertebrate predator–prey networks in the high Arctic. Ecology and Evolution, 14(6), Article ID e11470.
Open this publication in new window or tab >>Properties of vertebrate predator–prey networks in the high Arctic
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2024 (English)In: Ecology and Evolution, E-ISSN 2045-7758, Vol. 14, no 6, article id e11470Article in journal (Refereed) Published
Abstract [en]

Predation is an important ecological process that can significantly impact the maintenance of ecosystem services. In arctic environments, the relative ecological importance of predation is thought to be increasing due to climate change, partly because of increased productivity with rising temperatures. Therefore, understanding predator–prey interactions in arctic ecosystems is vital for the sustainable management of these northern regions. Network theory provides a framework for quantifying the structures of ecological interactions. In this study, we use dietary observations on mammalian and avian predators in a high arctic region, including isolated peninsulas on Ellesmere Island and north Greenland, to construct bipartite trophic networks. We quantify the complexity, specialization, and nested as well as modular structures of these networks and also determine if these properties varied among the peninsulas. Mammal prey remains were the dominant diet item for all predators, but there was spatial variation in diet composition among peninsulas. The predator–prey networks were less complex, had more specialized interactions, and were more nested and more modular than random expectations. However, the networks displayed only moderate levels of modularity. Predator species had less specialized interactions with prey than prey had with predators. All network properties differed among the peninsulas, which highlights that ecosystems often show complex responses to environmental characteristics. We suggest that gaining knowledge about spatial variation in the characteristics of predator–prey interactions can enhance our ability to manage ecosystems exposed to environmental perturbations, particularly in high arctic environments subject to rapid environmental change. 

Keywords
Ellesmere Island, Greenland, modularity, nestedness, predation, trophic network
National Category
Ecology
Identifiers
urn:nbn:se:su:diva-232264 (URN)10.1002/ece3.11470 (DOI)001235046800001 ()38826159 (PubMedID)2-s2.0-85193356987 (Scopus ID)
Available from: 2024-08-09 Created: 2024-08-09 Last updated: 2024-08-09Bibliographically approved
Clements, H. S., Biggs, R., Dalerum, F. & Woodhouse, G. M. (2024). The bii4africa dataset of faunal and floral population intactness estimates across Africa's major land uses. Scientific data, 11(1), Article ID 191.
Open this publication in new window or tab >>The bii4africa dataset of faunal and floral population intactness estimates across Africa's major land uses
2024 (English)In: Scientific data, ISSN 2052-4463, Vol. 11, no 1, article id 191Article in journal (Refereed) Published
Abstract [en]

Sub-Saharan Africa is under-represented in global biodiversity datasets, particularly regarding the impact of land use on species' population abundances. Drawing on recent advances in expert elicitation to ensure data consistency, 200 experts were convened using a modified-Delphi process to estimate 'intactness scores': the remaining proportion of an 'intact' reference population of a species group in a particular land use, on a scale from 0 (no remaining individuals) to 1 (same abundance as the reference) and, in rare cases, to 2 (populations that thrive in human-modified landscapes). The resulting bii4africa dataset contains intactness scores representing terrestrial vertebrates (tetrapods: ±5,400 amphibians, reptiles, birds, mammals) and vascular plants (±45,000 forbs, graminoids, trees, shrubs) in sub-Saharan Africa across the region's major land uses (urban, cropland, rangeland, plantation, protected, etc.) and intensities (e.g., large-scale vs smallholder cropland). This dataset was co-produced as part of the Biodiversity Intactness Index for Africa Project. Additional uses include assessing ecosystem condition; rectifying geographic/taxonomic biases in global biodiversity indicators and maps; and informing the Red List of Ecosystems.

National Category
Ecology Oceanography, Hydrology and Water Resources
Identifiers
urn:nbn:se:su:diva-227975 (URN)10.1038/s41597-023-02832-6 (DOI)001163242800001 ()38346970 (PubMedID)2-s2.0-85185102759 (Scopus ID)
Available from: 2024-04-05 Created: 2024-04-05 Last updated: 2024-04-05Bibliographically approved
Peña, R., Schleuning, M., Dalerum, F., Donoso, I., Rodríguez-Pérez, J. & García, D. (2023). Abundance and trait-matching both shape interaction frequencies between plants and birds in seed-dispersal networks. Basic and Applied Ecology, 66, 11-21
Open this publication in new window or tab >>Abundance and trait-matching both shape interaction frequencies between plants and birds in seed-dispersal networks
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2023 (English)In: Basic and Applied Ecology, ISSN 1439-1791, E-ISSN 1618-0089, Vol. 66, p. 11-21Article in journal (Refereed) Published
Abstract [en]

Abundance and trait-driven processes have both been identified as potential mechanisms in determining the occurrence of species interactions. However, little is known about how these two mechanisms interact to determine the relative frequencies of interactions between species, and thereby species-specific contributions to ecological functions. Here, we evaluate the effect of both species’ abundance and trait-matching on the occurrence of plant-bird seed dispersal interactions in the Cantabrian Range (northern Spain). For two years at fourteen plots, we independently sampled the abundance and diversity of fleshy-fruited plants and frugivores, as well as the consumption of fruits by birds. We quantified trait-matching by applying a food-web approach based on the log-ratios of species traits relevant to seed dispersal and traits related to fruit-handling and foraging-stratum. We fitted multi-level models incorporating phylogenetic relatedness to identify phylogenetically independent effects of species abundance and trait-matching on interaction frequencies. Fitted models showed that species abundances of both plants and birds always had strong positive effects on interaction frequencies. Trait-matching effects associated with fruit-handling were weak, but consistent across years, whereas those derived from foraging stratum varied across years, according to strong interannual changes in species abundance. Our findings reveal that both species abundance and functional traits are required for a mechanistic understanding of species interactions, as well as for predicting species roles in ecosystems under global change.

Keywords
Fleshy-fruited plants, Legitimate seed dispersers, Neutral processes, Niche-driven processes
National Category
Biological Sciences
Identifiers
urn:nbn:se:su:diva-214494 (URN)10.1016/j.baae.2022.11.008 (DOI)000904446500002 ()2-s2.0-85144310498 (Scopus ID)
Available from: 2023-02-07 Created: 2023-02-07 Last updated: 2023-02-07Bibliographically approved
Filella, J. B., Bonilla, C. C., Quispe, E. & Dalerum, F. (2023). Artificial intelligence as a potential tool for micro-histological analysis of herbivore diets. European Journal of Wildlife Research, 69(1), Article ID 11.
Open this publication in new window or tab >>Artificial intelligence as a potential tool for micro-histological analysis of herbivore diets
2023 (English)In: European Journal of Wildlife Research, ISSN 1612-4642, E-ISSN 1439-0574, Vol. 69, no 1, article id 11Article in journal (Refereed) Published
Abstract [en]

Different non-invasive techniques have been used to determine herbivore diet composition from fecal samples, including micro-histological analysis of epidermal fragments. This method can provide reliable semi-quantitative data through the identification of plant cell structures visualized under an optical microscope. However, this method is highly time-consuming and it requires significant expertise in microscopic identification. Since micro-histological analysis is based on pattern recognition, artificial intelligence (AI) could be used to make this method more time efficient through automated identification and counting of epidermal fragments. We developed a software application based on an AI model that, appropriately trained, could identify and count epidermal fragments from photographed microscope slides. We compared the performance of this model to that of visual identification by a trained observer using in vitro mixtures of fragments from two plant species, Arbutus unedo and Rubia peregrina, with very different epidermal characteristics. Both the human observer and the AI model estimated proportions of plant fragments very close to those of the original mixtures. In addition, once trained, the AI model was over 350 times faster in identifying and counting fragments compared to a human observer. Our study highlights the potential of AI to be applied to the study of herbivore diets for labor-intensive pattern recognition tasks. 

Keywords
Machine learning, Deep learning, Epidermal fragments, Fecal samples, Microscope slides, Cuticle analysis
National Category
Biological Sciences
Identifiers
urn:nbn:se:su:diva-214361 (URN)10.1007/s10344-022-01640-4 (DOI)000909755900001 ()2-s2.0-85145671448 (Scopus ID)
Available from: 2023-02-01 Created: 2023-02-01 Last updated: 2023-02-01Bibliographically approved
Måsviken, J., Marquina, D., Norén, K., Dalén, L. & Dalerum, F. (2023). Elevational variation of spider and insect communities in the Swedish mountains. Ecosphere, 14(6), Article ID e4540.
Open this publication in new window or tab >>Elevational variation of spider and insect communities in the Swedish mountains
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2023 (English)In: Ecosphere, E-ISSN 2150-8925, Vol. 14, no 6, article id e4540Article in journal (Refereed) Published
Abstract [en]

Mountain topography gives rise to often dramatic climate-driven elevation gradients in primary productivity, which can generate substantial biodiversity variation. Therefore, mountain areas may be particularly useful for evaluating the ecological consequences of climate change. Arthropods are the most diverse animal phylum, which play important roles in most ecosystems. However, despite their ecological importance, we have limited information on how arthropods vary along elevation gradients. We investigated how taxonomic richness, taxonomic composition, and spatial structuring of spider and insect communities varied along elevation gradients and among three geographic locations in a mountain region of northern Sweden. The locations provided a latitude gradient spanning approximately 3° (from 62° N to 65° N), but were otherwise selected to contain similar environmental characteristics. Taxonomic richness of both spiders and insects declined monotonically with increasing elevation, and there were limited differences between the geographic locations in such declines. Taxonomic composition varied with elevation for both taxonomic groups, but also differed among the three sites. Linyphiid spiders were more widely distributed along the elevation gradients than other spider taxa, whereas a broad taxonomic range of insects occurred over almost all elevations. We observed nested as well as modular spatial distributions of both spider and insect communities along the elevation gradients. While the modular patterns suggest that species turnover has generated distinct communities at different elevations, some generalist species were still widespread throughout large parts of the gradients. Our results point to smaller differences among geographic locations than among taxonomic groups in how taxonomic richness and community structuring varied with elevation. We interpret these results as support for taxonomically specific adaptations to environmental conditions being important for structuring arthropod communities. We also suggest that climate-driven changes to arthropod communities in mountain environments may be regulated by two not mutually exclusive processes, one in which generalist species may become more dominant and shift their ranges upward and one in which high-elevation specialists may go extinct because of increasingly fragmented habitats.

Keywords
altitude, Araneae, Arthropoda, Insecta, latitude, mountain ecology, spatial structure, species composition, species richness, taxonomic diversity
National Category
Ecology
Identifiers
urn:nbn:se:su:diva-229649 (URN)10.1002/ecs2.4540 (DOI)001000610900001 ()2-s2.0-85163372532 (Scopus ID)
Available from: 2024-05-27 Created: 2024-05-27 Last updated: 2024-10-16Bibliographically approved
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ORCID iD: ORCID iD iconorcid.org/0000-0001-9737-8242

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