Northern lakes are important sources of greenhouse gases carbon dioxide and methane to the atmosphere. Emissions are expected to increase as the climate continues to warm. Even so, lake carbon budgets are currently poorly constrained. This is in part because of a limited understanding of the processes that govern the flux. This thesis focuses on the physical and biogeochemical drivers of carbon trace gas emissions from three small, post-glacial lakes situated within the Stordalen Mire, a subarctic peatland underlain by thawing permafrost in northern Sweden. A unique, multiyear dataset is used to quantify the importance of different emission pathways – ebullition, turbulence-driven diffusion and release from storage – on short and long timescales. In summer and on seasonal to interannual timescales, emissions are robust functions of thermal energy input. Short-term storage-and-release cycles are governed by kinetic drivers, such as turbulence fuelled by wind shear and, to a lesser extent, by thermal convection. In winter, when the lakes are ice-covered, persistent anoxia and density-driven currents enable methane accumulation at rates exceeding summer emissions. Release at ice-off in spring can constitute the majority of annual methane emissions and scales predictably with ice-cover season length, except in warm winters when snowmelt displaces lake water. Most lake flux studies focus on the warmest summer months and omit the spring efflux, as well as emissions in the colder ice-free months which, because of the well-known temperature-dependency of carbon cycling processes, tend to be low. The latter sampling bias may lead to a substantial overestimation of the ice-free flux in regional and global lake emission budgets. Temperature proxies, potentially combined with gas transfer models, can efficiently gap-fill colder months to arrive at a more representative flux estimate, but important feedbacks, such as lake degassing with increasing wind speed, must be taken into account. The mechanisms emerging from intense study of the Stordalen lakes are likely to be found in a majority of northern lakes, which are small, seasonally ice-covered and of post-glacial origin. However, because gas transfer velocity and temperature sensitivity are spatiotemporally variable, field observations remain essential for the development and calibration of models, and to predict future emissions.