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Surface assimilation of inteins to host cytosolic environments
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics.ORCID iD: 0000-0002-8204-7798
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics.
(English)Manuscript (preprint) (Other academic)
National Category
Biophysics
Identifiers
URN: urn:nbn:se:su:diva-219981OAI: oai:DiVA.org:su-219981DiVA, id: diva2:1786864
Available from: 2023-08-10 Created: 2023-08-10 Last updated: 2023-08-10
In thesis
1. Navigating the Cellular Crowd: Physicochemical Properties of Protein Surfaces as Evolved Interaction Guides
Open this publication in new window or tab >>Navigating the Cellular Crowd: Physicochemical Properties of Protein Surfaces as Evolved Interaction Guides
2023 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

The cellular interior is characterised by high concentrations of macromolecules. Compared with dilute conditions, the crowd modifies proteins' ability to fold, diffuse and, ultimately, carry out their biological functions. Cellular fitness depends on ensuring an adequate balance between interactivity and diffusivity.

In this thesis, I discuss how a colloidal description of the cell highlights the central role of electrostatics in protein surface optimisation. By recognising that the modulation of protein-protein interactions concerns the whole proteome, I map the physicochemical preferences of cellular organisms across taxonomic and ecological divisions. Moreover, I propose that all surface residues participate in tuning protein interactions to the correct affinity, within a continuum that spans several orders of magnitude. Finally, I turn to horizontally spreading inteins to gauge the strength of the selective pressures acting on protein surfaces.

Place, publisher, year, edition, pages
Stockholm: Department of Biochemistry and Biophysics, Stockholm University, 2023. p. 47
Keywords
protein interactions, inteins, physicochemical properties, protein surfaces, evolution, cellular crowding, electrostatics
National Category
Biophysics
Research subject
Biophysics
Identifiers
urn:nbn:se:su:diva-219982 (URN)978-91-8014-408-7 (ISBN)978-91-8014-409-4 (ISBN)
Public defence
2023-09-22, Magnélisalen, Kemiska övningslaboratoriet, Svante Arrhenius väg 16B, Stockholm, 09:00 (English)
Opponent
Supervisors
Available from: 2023-08-30 Created: 2023-08-10 Last updated: 2023-08-30Bibliographically approved

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CiteExportLink to record
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  • apa
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