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A drug pocket at the lipid bilayer-potassium channel interface
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics. Stockholm University, Science for Life Laboratory (SciLifeLab).
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Number of Authors: 72017 (English)In: Science Advances, E-ISSN 2375-2548, Vol. 3, no 10, article id e1701099Article in journal (Refereed) Published
Abstract [en]

Many pharmaceutical drugs against neurological and cardiovascular disorders exert their therapeutic effects by binding to specific sites on voltage-gated ion channels of neurons or cardiomyocytes. To date, all molecules targeting known ion channel sites bind to protein pockets that are mainly surrounded by water. We describe a lipid-protein drug-binding pocket of a potassium channel. We synthesized and electrophysiologically tested 125 derivatives, analogs, and related compounds to dehydroabietic acid. Functional data in combination with docking and molecular dynamics simulations mapped a binding site for small-molecule compounds at the interface between the lipid bilayer and the transmembrane segments S3 and S4 of the voltage-sensor domain. This fundamentally new binding site for small-molecule compounds paves the way for the design of new types of drugs against diseases caused by altered excitability.

Place, publisher, year, edition, pages
2017. Vol. 3, no 10, article id e1701099
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Neurosciences
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URN: urn:nbn:se:su:diva-151005DOI: 10.1126/sciadv.1701099ISI: 000417998700021PubMedID: 29075666Scopus ID: 2-s2.0-85041797106OAI: oai:DiVA.org:su-151005DiVA, id: diva2:1172804
Available from: 2018-01-10 Created: 2018-01-10 Last updated: 2022-06-17Bibliographically approved

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Lindahl, ErikElinder, Fredrik

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