Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
On the interactions of the receptor-binding domain of SARS-CoV-1 and SARS-CoV-2 spike proteins with monoclonal antibodies and the receptor ACE2
Stockholm University, Faculty of Science, Department of Materials and Environmental Chemistry (MMK). Nanjing Tech University, PR China; Poni Institute of Macromolecular Chemistry, Romania; Luleå University of Technology, Sweden.
Number of Authors: 32020 (English)In: Virus Research, ISSN 0168-1702, E-ISSN 1872-7492, Vol. 285, article id 198021Article in journal (Refereed) Published
Abstract [en]

A new betacoronavirus named SARS-CoV-2 has emerged as a new threat to global health and economy. A promising target for both diagnosis and therapeutics treatments of the new disease named COVID-19 is the coronavirus (CoV) spike (S) glycoprotein. By constant-pH Monte Carlo simulations and the PROCEEDpKa method, we have mapped the electrostatic epitopes for four monoclonal antibodies and the angiotensin-converting enzyme 2 (ACE2) on both SARS-CoV-1 and the new SARS-CoV-2 S receptor binding domain (RBD) proteins. We also calculated free energy of interactions and shown that the S RBD proteins from both SARS viruses binds to ACE2 with similar affinities. However, the affinity between the S RBD protein from the new SARS-CoV-2 and ACE2 is higher than for any studied antibody previously found complexed with SARS-CoV-1. Based on physical chemical analysis and free energies estimates, we can shed some light on the involved molecular recognition processes, their clinical aspects, the implications for drug developments, and suggest structural modifications on the CR3022 antibody that would improve its binding affinities for SARS-CoV-2 and contribute to address the ongoing international health crisis.

Place, publisher, year, edition, pages
2020. Vol. 285, article id 198021
Keywords [en]
Epitopes, Binding affinity, Antibody development, Host-pathogen interaction, Electrostatic interactions, Antigenic analysis, Computer simulation, pH effect, Coronavirus, SARS-CoV-2, ACE2, Protein-protein interaction
National Category
Biological Sciences
Identifiers
URN: urn:nbn:se:su:diva-183945DOI: 10.1016/j.virusres.2020.198021ISI: 000540355300021PubMedID: 32416259OAI: oai:DiVA.org:su-183945DiVA, id: diva2:1462328
Available from: 2020-08-28 Created: 2020-08-28 Last updated: 2022-02-25Bibliographically approved

Open Access in DiVA

No full text in DiVA

Other links

Publisher's full textPubMed

Authority records

Laaksonen, Aatto

Search in DiVA

By author/editor
Laaksonen, Aatto
By organisation
Department of Materials and Environmental Chemistry (MMK)
In the same journal
Virus Research
Biological Sciences

Search outside of DiVA

GoogleGoogle Scholar

doi
pubmed
urn-nbn

Altmetric score

doi
pubmed
urn-nbn
Total: 58 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf