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Energetics for Proton Reduction in FeFe Hydrogenase
Stockholm University, Faculty of Science, Department of Organic Chemistry.ORCID iD: 0000-0001-7787-1881
Number of Authors: 22020 (English)In: Journal of Physical Chemistry A, ISSN 1089-5639, E-ISSN 1520-5215, Vol. 124, no 50, p. 10540-10549Article in journal (Refereed) Published
Abstract [en]

The energetics for proton reduction in FeFe-hydrogenase has been reinvestigated by theoretical modeling, in light of recent experiments. Two different mechanisms have been considered. In the first one, the bridging hydride position was blocked by the enzyme, which is the mechanism that has been supported by a recent spectroscopic study by Cramer et al. A major difficulty in the present study to agree with experimental energetics was to find the right position for the added proton in the first reduction step. It was eventually found that the best position was as a terminal hydride on the distal iron, which has not been suggested in any of the recent, experimentally based mechanisms. The lowest transition state was surprisingly found to be a bond formation between a proton on a cysteine and the terminal hydride. This type of TS is similar to the one for heterolytic H-2 cleavage in NiFe hydrogenase. The second mechanism investigated here is not supported by the present calculations or the recent experiments by Cramer et al., but was still studied as an interesting comparison. In that mechanism, the formation of the bridging hydride was allowed. The H-H formation barrier is only 3.6 kcal/mol higher than for the first mechanism, but there are severe problems concerning the motion of the protons.

Place, publisher, year, edition, pages
2020. Vol. 124, no 50, p. 10540-10549
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Chemical Sciences Biological Sciences
Identifiers
URN: urn:nbn:se:su:diva-191154DOI: 10.1021/acs.jpca.0c08705ISI: 000608855900013PubMedID: 33275428OAI: oai:DiVA.org:su-191154DiVA, id: diva2:1536598
Available from: 2021-03-11 Created: 2021-03-11 Last updated: 2022-02-25Bibliographically approved

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Siegbahn, Per E. M.Liao, Rong-Zhen

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