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The pETOPT collection of expression plasmids: Better performing versions of the old favorites
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics. (Daniel Daley)
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics. (Daniel Daley)
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics. (Daniel Daley)
Stockholm University, Faculty of Science, Department of Biochemistry and Biophysics. (Daniel O. Daley)
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Herein we constructed the pETOPT collection by re-engineering the most commonly used expression plasmids for recombinant protein production in Escherichia coli (pET28, pET21, pET22, pET15, pET30, pET32). Each pETOPT plasmid has been designed for strains with both high and low levels of the T7 RNA polymerase by incorporating improved genetic modules for transcriptional initiation, transcriptional termination, translation Initiation and plasmid selection / maintenance. And all plasmids are available with both the Tn903.1MIN (kana25) and Tn3.1MIN (amp20) antibiotic resistance markers, so that users have flexibility. pETOPT plasmids contain the same bells and whistles as original pET expression plasmids, but give higher production titres and better plasmid maintenance. They will provide a competitive advantage to biochemists, biophysicist and structural biologists in academia, as well as in the biotech and biopharma sectors.

Keywords [en]
recombinant protein, pET system, design flaw, genetic module, BL21(DE3), T7plac
National Category
Natural Sciences Biochemistry Molecular Biology
Research subject
Biochemistry
Identifiers
URN: urn:nbn:se:su:diva-232289OAI: oai:DiVA.org:su-232289DiVA, id: diva2:1888140
Available from: 2024-08-12 Created: 2024-08-12 Last updated: 2025-02-20
In thesis
1. New genetic modules for protein production in microbial cell factories
Open this publication in new window or tab >>New genetic modules for protein production in microbial cell factories
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Escherichia coli (E. coli) is a commonly used microbial cell factory in recombinant protein production. Although extensive efforts have been made to optimize the production of soluble, functional recombinant proteins, sufficient yields are still not obtainable for all proteins. This doctoral thesis presents tools which address concerns of insufficient titres. These tools consist of 1) improvements to antibiotic resistance fragments 2) a new collection of pET expression plasmids containing re-designed antibiotic resistance fragments, transcription- and translation initiation modules and terminator module 3) description of a biosensor which can detect issues in quality of recombinant protein production in vivo. The use of these tools could possibly increase the yields of recombinant protein.

Place, publisher, year, edition, pages
Stockholm: Department of Biochemsitry and Biophysics, Stockholm University, 2024. p. 75
Keywords
Microbial cell factories, recombinant protein, recombinant protein production, protein production system, E. coli, pET, pET system, protein production optimization, expression plasmid, biosensor, genetic modules
National Category
Biochemistry Molecular Biology
Research subject
Biochemistry
Identifiers
urn:nbn:se:su:diva-232294 (URN)978-91-8014-877-1 (ISBN)978-91-8014-878-8 (ISBN)
Public defence
2024-09-25, Magnélisalen, Kemiska övningslaboratoriet, Svante Arrhenius väg 16 B, Stockholm, 14:00 (English)
Opponent
Supervisors
Available from: 2024-09-02 Created: 2024-08-12 Last updated: 2025-02-20Bibliographically approved

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Khananisho, DianaNørholm, Morten H. H.Daley, Daniel O.
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