Coastal ecosystems dominate oceanic methane (CH₄) emissions. However, there is limited knowledge about how biotic interactions between infauna and aerobic methanotrophs (i.e. CH₄ oxidizing bacteria) drive the spatial–temporal dynamics of these emissions. Here, we investigated the role of meio- and macrofauna in mediating CH₄ sediment–water fluxes and aerobic methanotrophic activity that can oxidize significant portions of CH₄. We show that macrofauna increases CH₄ fluxes by enhancing vertical solute transport through bioturbation, but this effect is somewhat offset by high meiofauna abundance. The increase in CH₄ flux reduces CH₄ pore-water availability, resulting in lower abundance and activity of aerobic methanotrophs, an effect that counterbalances the potential stimulation of these bacteria by higher oxygen flux to the sediment via bioturbation. These findings indicate that a larger than previously thought portion of CH₄ emissions from coastal ecosystems is due to faunal activity and multiple complex interactions with methanotrophs. 

In highly seasonal systems, the emergence of planktonic resting stages from the sediment is a key driver for bloom timing and plankton community composition. The termination of the resting phase is often linked to environmental cues, but the extent to which recruitment of resting stages is affected by climate change remains largely unknown for coastal environments. Here we investigate phyto- and zooplankton recruitment from oxic sediments in the Baltic Sea in a controlled experiment under proposed temperature and light increase during the spring and summer. We find that emergence of resting stage differs between seasons and the abiotic environment. Phytoplankton recruitment from resting stages were high in spring with significantly higher emergence rates at increased temperature and light levels for dinoflagellate and cyanobacteria than for diatoms, which had highest emergence under cold and dark conditions. In comparison, hatching of copepod nauplii was not affected by increased temperature and light levels. These results show that activation of plankton resting stages are affected to different degrees by increasing temperature and light levels, indicating that climate change affects plankton dynamics through processes related to resting stage termination with potential consequences for bloom timing, community composition and trophic mismatch.

Rising temperature is one of the most visible effects of global change on Earth; however, it is barely known how moderate or extreme warming events impact the trophic interactions and the energy transfer in food webs. Combining a mesocosm approach and two-point dilution incubations, we quantified how natural plankton assemblages respond to moderate and extreme warming (+6°C vs. +12°C above ambient temperature), covering a nitrogen-to-phosphorus gradient from nutrient-saturated to limited conditions. We addressed how both drivers altered the community structure and mediated the phytoplankton growth (μ) and microzooplankton grazing (m) rates. Moderate and extreme warming effects on the microzooplankton–phytoplankton relationship differed and were mediated by time. This trophic interaction was weakened due to μ outpacing m regardless of the warming treatment at the middle of the experiment. By contrast, after the acclimation period, the trophic interaction was strengthened by increased grazing under extreme warming. The variable grazing pressure found at different temporal scales only under extreme warming could be due to a decreased microzooplankton grazing pressure with increasing temperature when prey biomass is low, and vice versa. Also, it could be a consequence of a switch toward mixotrophy or that the temperatures experienced by grazers were suboptimal compared to their prey. Finally, we found that temperature was the main driver whereas resource availability played a minor role in this trophic interaction. As climate change will intensify in the future, food webs could be less productive but more efficient, and thus, potentially support a higher secondary production.

Phototrophic protists are a fundamental component of the world's oceans by serving as the primary source of energy, oxygen, and organic nutrients for the entire ecosystem. Due to the high thermal seasonality of their habitat, temperate protists could harbour many well-adapted species that tolerate ocean warming. However, these species may not sustain ecosystem functions equally well. To address these uncertainties, we conducted a 30-day mesocosm experiment to investigate how moderate (12 °C) and substantial (18 °C) warming compared to ambient conditions (6 °C) affect the composition (18S rRNA metabarcoding) and ecosystem functions (biomass, gross oxygen productivity, nutritional quality – C:N and C:P ratio) of a North Sea spring bloom community. Our results revealed warming-driven shifts in dominant protist groups, with haptophytes thriving at 12 °C and diatoms at 18 °C. Species responses primarily depended on the species' thermal traits, with indirect temperature effects on grazing being less relevant and phosphorus acting as a critical modulator. The species Phaeocystis globosa showed highest biomass on low phosphate concentrations and relatively increased in some replicates of both warming treatments. In line with this, the C:P ratio varied more with the presence of P. globosa than with temperature. Examining further ecosystem responses under warming, our study revealed lowered gross oxygen productivity but increased biomass accumulation whereas the C:N ratio remained unaltered. Although North Sea species exhibited resilience to elevated temperatures, a diminished functional similarity and heightened compositional variability indicate potential ecosystem repercussions for higher trophic levels. In conclusion, our research stresses the multifaceted nature of temperature effects on protist communities, emphasising the need for a holistic understanding that encompasses trait-based responses, indirect effects, and functional dynamics in the face of exacerbating temperature changes.