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Publikationer (10 of 13) Visa alla publikationer
Pinheiro, A. S., Tsarouhas, V., Senti, K., Arefin, B. & Samakovlis, C. (2023). Scavenger receptor endocytosis controls apical membrane morphogenesis in the Drosophila airways. eLIFE, 12, Article ID e84974.
Öppna denna publikation i ny flik eller fönster >>Scavenger receptor endocytosis controls apical membrane morphogenesis in the Drosophila airways
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2023 (Engelska)Ingår i: eLIFE, E-ISSN 2050-084X, Vol. 12, artikel-id e84974Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

The acquisition of distinct branch sizes and shapes is a central aspect in tubular organ morphogenesis and function. In the Drosophila airway tree, the interplay of apical extracellular matrix (ECM) components with the underlying membrane and cytoskeleton controls tube elongation, but the link between ECM composition with apical membrane morphogenesis and tube size regulation is elusive. Here, we characterized Emp (epithelial membrane protein), a Drosophila CD36 homolog belonging to the scavenger receptor class B protein family. emp mutant embryos fail to internalize the luminal chitin deacetylases Serp and Verm at the final stages of airway maturation and die at hatching with liquid filled airways. Emp localizes in apical epithelial membranes and shows cargo selectivity for LDLr-domain containing proteins. emp mutants also display over elongated tracheal tubes with increased levels of the apical proteins Crb, DE-cad, and phosphorylated Src (p-Src). We show that Emp associates with and organizes the βH-Spectrin cytoskeleton and is itself confined by apical F-actin bundles. Overexpression or loss of its cargo protein Serp lead to abnormal apical accumulations of Emp and perturbations in p-Src levels. We propose that during morphogenesis, Emp senses and responds to luminal cargo levels by initiating apical membrane endocytosis along the longitudinal tube axis and thereby restricts airway elongation.

Nationell ämneskategori
Utvecklingsbiologi
Identifikatorer
urn:nbn:se:su:diva-225396 (URN)10.7554/eLife.84974 (DOI)001134618100001 ()37706489 (PubMedID)2-s2.0-85171664401 (Scopus ID)
Tillgänglig från: 2024-01-18 Skapad: 2024-01-18 Senast uppdaterad: 2024-10-16Bibliografiskt granskad
Dziedziech, A., Schmid, M., Arefin, B., Kienzle, T., Krautz, R. & Theopold, U. (2019). Data on Drosophila clots and hemocyte morphologies using GFP-tagged secretory proteins: Prophenoloxidase and transglutaminase. Data in Brief, 25, Article ID 104229.
Öppna denna publikation i ny flik eller fönster >>Data on Drosophila clots and hemocyte morphologies using GFP-tagged secretory proteins: Prophenoloxidase and transglutaminase
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2019 (Engelska)Ingår i: Data in Brief, E-ISSN 2352-3409, Vol. 25, artikel-id 104229Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

Insect hemolymph coagulation: Kinetics of classically and non-classically secreted clotting factors Schmid et al., 2019. The linked article demonstrates the localization of two secretory proteins in Drosophila melanogaster, Prophenoloxidase (PPO2) and Transglutaminase-A (Tg) in hemocytes as well the clot with different tissue-specific drivers. Here we provide further data for the usefulness of the GFP-tagged version of the two crosslinking enzymes that are involved in clot hardening. The morphology of crystal cells is described using GFP-tagged PPO2 rather than with the use of antibodies in ex vivo hemolymph preparations. The use of the GFP-tagged proteins PPO2 and Tg is shown in additional contexts.

Nyckelord
Insect immunity, Innate immunity, Non-classical secretion, Transglutaminase, Prophenoloxidase, Coagulation, Hemocytes
Nationell ämneskategori
Biologiska vetenskaper
Identifikatorer
urn:nbn:se:su:diva-176629 (URN)10.1016/j.dib.2019.104229 (DOI)000495104500254 ()31367663 (PubMedID)
Tillgänglig från: 2019-12-27 Skapad: 2019-12-27 Senast uppdaterad: 2022-03-23Bibliografiskt granskad
Schmid, M. R., Dziedziech, A., Arefin, B., Kienzle, T., Wang, Z., Akhter, M., . . . Theopold, U. (2019). Insect hemolymph coagulation: Kinetics of classically and non-classically secreted clotting factors. Insect Biochemistry and Molecular Biology, 109, 63-71
Öppna denna publikation i ny flik eller fönster >>Insect hemolymph coagulation: Kinetics of classically and non-classically secreted clotting factors
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2019 (Engelska)Ingår i: Insect Biochemistry and Molecular Biology, ISSN 0965-1748, E-ISSN 1879-0240, Vol. 109, s. 63-71Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

In most insects, hemolymph coagulation, which is analogous to mammalian blood clotting, involves close collaboration between humoral and cellular components. To gain insights into the secretion of cellular clotting factors, we created tagged versions of three different clotting factors. Our focus was on factors which are released in a non-classical manner and to characterize them in comparison to a protein that is classically released, namely Glutactin (Glt). Transglutaminase-A (Tg) and Prophenoloxidase 2 (PPO2), both of which lack signal peptide sequences, have been previously demonstrated to be released from plasmatocytes and crystal cells (CCs) respectively, the two hemocyte classes in naive larvae. We found that at the molecular level, Tg secretion resembles the release of tissue transglutaminase in mammals. Specifically, Drosophila Tg is associated with vesicular membranes and remains membrane-bound after release, in contrast to Glt, which we found localizes to a different class of vesicles and is integrated into clot fibers. PPO2 on the other hand, is set free from CCs through cytolysis. We confirm that PPO2 is a central component of the cytosolic crystals and find that the distribution of PPO2 appears to vary across crystals and cells. We propose a tentative scheme for the secretory events during early and late hemolymph coagulation.

Nyckelord
Drosophila melanogaster, Wounding, Clotting, Secretion, Non-classical secretion, Transglutaminase, Glutactin, Prophenoloxidase, Bacteria, Defense, Septic injury, Hemolymph, Coagulation
Nationell ämneskategori
Biologiska vetenskaper
Identifikatorer
urn:nbn:se:su:diva-170102 (URN)10.1016/j.ibmb.2019.04.007 (DOI)000470192100007 ()30974174 (PubMedID)
Tillgänglig från: 2019-07-02 Skapad: 2019-07-02 Senast uppdaterad: 2022-03-23Bibliografiskt granskad
Li, D., Luan, Y., Wang, L., Qi, M., Wang, J., Xu, J., . . . Li, M. (2018). Expression of the Shrimp wap gene in Drosophila elicits defense responses and protease inhibitory activity. Scientific Reports, 8, Article ID 8779.
Öppna denna publikation i ny flik eller fönster >>Expression of the Shrimp wap gene in Drosophila elicits defense responses and protease inhibitory activity
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2018 (Engelska)Ingår i: Scientific Reports, E-ISSN 2045-2322, Vol. 8, artikel-id 8779Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

The wap gene encodes a single whey acidic protein (WAP) domain-containing peptide from Chinese white shrimp (Fenneropenaeus chinensis), which shows broad-spectrum antimicrobial activities and proteinase inhibitory activities in vitro. To explore the medical applications of the WAP peptide, a wap gene transgenic Drosophila melanogaster was constructed. In wap-expressing flies, high expression levels of wap gene (> 100 times) were achieved, in contrast to those of control flies, by qRT-PCR analysis. The wap gene expression was associated with increased resistance to microbial infection and decreased bacterial numbers in the flies. In addition, the WAP protein extract from wap-expressing flies, compared with control protein extract from control flies, showed improved antimicrobial activities against broad Gram-positive and Gram-negative bacteria, including the clinical drug resistant bacterium of methicillin-resistant S. aureus (MRSA), improved protease inhibitor activities against crude proteinases and commercial proteinases, including elastase, subtilis proteinase A, and proteinase K in vitro, and improved growth rate and microbial resistance, as well as wound-healing in loach and mouse models. These results suggest that wap-expressing flies could be used as a food additive in aquaculture to prevent infections and a potential antibacterial for fighting drug-resistant bacteria.

Nationell ämneskategori
Medicinsk bioteknologi Biologiska vetenskaper
Identifikatorer
urn:nbn:se:su:diva-157650 (URN)10.1038/s41598-018-26466-6 (DOI)000434641100009 ()29884877 (PubMedID)
Tillgänglig från: 2018-06-25 Skapad: 2018-06-25 Senast uppdaterad: 2022-09-15Bibliografiskt granskad
Kunc, M., Arefin, B., Hyrsl, P. & Theopold, U. (2017). Monitoring the effect of pathogenic nematodes on locomotion of Drosophila larvae. fly, 11(3), 208-217
Öppna denna publikation i ny flik eller fönster >>Monitoring the effect of pathogenic nematodes on locomotion of Drosophila larvae
2017 (Engelska)Ingår i: fly, ISSN 1933-6934, Vol. 11, nr 3, s. 208-217Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

One of the key factors that determine the interaction between hosts and their parasites is the frequency of their interactions, which depends on the locomotory behavior of both parts. To address host behavior we used natural infections involving insect pathogenic nematodes and Drosophila melanogaster larvae as hosts. Using a modified version of a recently described method (FIMTrack) to assess several parameters in larger sets of animals, we initially detected specific differences in larval food searching when comparing Drosophila strains. These differences were further influenced by the presence of nematodes. Given a choice, Drosophila larvae clearly avoided nematodes irrespective of their genetic background. Our newly developed methods will be useful to test candidate genes and pathways involved in host/pathogen interactions in general and to assess specific parameters of their interaction.

Nyckelord
Drosophila melanogaster, entomopathogenic nematodes, FIMTrack, behavior, nematode, locomtion
Nationell ämneskategori
Biokemi Molekylärbiologi
Identifikatorer
urn:nbn:se:su:diva-147250 (URN)10.1080/19336934.2017.1297350 (DOI)000407571600007 ()28631995 (PubMedID)
Tillgänglig från: 2017-09-20 Skapad: 2017-09-20 Senast uppdaterad: 2025-02-20Bibliografiskt granskad
Arefin, B., Kunc, M., Krautz, R. & Theopold, U. (2017). The Immune Phenotype of Three Drosophila Leukemia Models. G3: Genes, Genomes, Genetics, 7(7), 2139-2149
Öppna denna publikation i ny flik eller fönster >>The Immune Phenotype of Three Drosophila Leukemia Models
2017 (Engelska)Ingår i: G3: Genes, Genomes, Genetics, E-ISSN 2160-1836, Vol. 7, nr 7, s. 2139-2149Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

Many leukemia patients suffer from dysregulation of their immune system, making them more susceptible to infections and leading to general weakening (cachexia). Both adaptive and innate immunity are affected. The fruit fly Drosophila melanogaster has an innate immune system, including cells of the myeloid lineage (hemocytes). To study Drosophila immunity and physiology during leukemia, we established three models by driving expression of a dominant-active version of the Ras oncogene (Ras(V12)) alone or combined with knockdowns of tumor suppressors in Drosophila hemocytes. Our results show that phagocytosis, hemocyte migration to wound sites, wound sealing, and survival upon bacterial infection of leukemic lines are similar to wild type. We find that in all leukemic models the two major immune pathways (Toll and Imd) are dysregulated. Toll-dependent signaling is activated to comparable extents as after wounding wild-type larvae, leading to a proinflammatory status. In contrast, Imd signaling is suppressed. Finally, we notice that adult tissue formation is blocked and degradation of cell masses during metamorphosis of leukemic lines, which is akin to the state of cancer-dependent cachexia. To further analyze the immune competence of leukemic lines, we used a natural infection model that involves insect-pathogenic nematodes. We identified two leukemic lines that were sensitive to nematode infections. Further characterization demonstrates that despite the absence of behavioral abnormalities at the larval stage, leukemic larvae show reduced locomotion in the presence of nematodes. Taken together, this work establishes new Drosophila models to study the physiological, immunological, and behavioral consequences of various forms of leukemia.

Nyckelord
Ras, oncogene, nematodes, insect immunity, hemocyte, Genetics of Immunity
Nationell ämneskategori
Biologiska vetenskaper
Identifikatorer
urn:nbn:se:su:diva-145330 (URN)10.1534/g3.117.039487 (DOI)000404991600012 ()
Tillgänglig från: 2017-07-28 Skapad: 2017-07-28 Senast uppdaterad: 2024-01-17Bibliografiskt granskad
Arefin, B., Kunc, M., Krautz, R. & Theopold, U. (2016). Drosophila models for different grades of leukemia.
Öppna denna publikation i ny flik eller fönster >>Drosophila models for different grades of leukemia
2016 (Engelska)Manuskript (preprint) (Övrigt vetenskapligt)
Nationell ämneskategori
Biologiska vetenskaper
Forskningsämne
molekylärbiologi
Identifikatorer
urn:nbn:se:su:diva-134331 (URN)978-91-7649-536-0 (ISBN)
Tillgänglig från: 2016-10-05 Skapad: 2016-10-04 Senast uppdaterad: 2022-02-28Bibliografiskt granskad
Arefin, M. B. B. (2016). Molecular characterization of the Drosophila responses towards nematodes. (Doctoral dissertation). Stockholm: Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University
Öppna denna publikation i ny flik eller fönster >>Molecular characterization of the Drosophila responses towards nematodes
2016 (Engelska)Doktorsavhandling, sammanläggning (Övrigt vetenskapligt)
Abstract [en]

A sophisticated evolutionary conserved innate immune system has evolved in insects to fight pathogens and to restrict damage in harmful (danger) situations including cancer. A significant amount of knowledge about different infection models in Drosophila has been generated in past decades, which revealed functional resemblances and implications for vertebrate systems. However, how Drosophila responds towards multicellular parasitic nematodes and in danger situations is still little understood. Therefore, the aim of the thesis was to characterize multiple aspects of the host defense in the two important contexts mentioned above.

We analyzed the transcriptome profiles of nematode-infected Drosophila larvae with uninfected samples. For this we employed the entomopathogenic nematode Heterorhabditis bacteriophora with its symbiont Photorhabdus luminescence to infect Drosophila larvae. We found 642 genes were differentially regulated upon infection. Among them a significant portion belonged to immune categories. Further functional analysis identified a thioester containing protein TEP3, a recognition protein GNBP-like 3, the basement membrane component protein Glutactin and several other small peptides. Upon loss or reduced expression of these genes hosts showed mortality during nematode infections. This study uncovers a novel function for several of the genes in immunity.

Furthermore, we investigated the cellular response towards nematodes. When we eliminated hemocytes genetically (referred to as hml-apo) in Drosophila, we found hml-apo larvae are resistant to nematodes. Subsequent characterization of hml-apo larvae showed massive lamellocyte differentiation (another blood cell type which is rare in naïve larvae), emergence of melanotic masses, up- and down-regulation of Toll and Imd signaling respectively suggesting a pro-inflammatory response. Moreover, a striking defective leg phenotype in adult escapers from pupal lethality was observed. We identified nitric oxide (NO) as a key regulator of these processes. We also showed that imaginal disc growth factors 3 (IDGF3): (a) protects hosts against nematodes, (b) is a clotting component and (c) negatively regulates Wnt and JAK/STAT signaling. To follow larval behavior in the presence or absence of nematodes we monitored Drosophila larval locomotion behaviors using FIMtrack (a recently devised automated method) to elucidate evasive strategies of hosts. Finally, we characterized host defenses in three Drosophila leukemia models with and without nematode infection. Taken together, these studies shed light on host responses in two crucial circumstances, nematode infections and danger situations.

Ort, förlag, år, upplaga, sidor
Stockholm: Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 2016. s. 65
Nyckelord
Drosophila, nematodes, infection, danger situations, immune response, coagulation, apoptosis, nitric oxide, leukemia
Nationell ämneskategori
Biokemi Molekylärbiologi Genetik och genomik Immunologi
Forskningsämne
molekylärbiologi
Identifikatorer
urn:nbn:se:su:diva-134346 (URN)978-91-7649-535-3 (ISBN)978-91-7649-536-0 (ISBN)
Disputation
2016-11-24, Vivi Täckholmsalen (Q-salen), NPQ-huset, Svante Arrhenius väg 20, Stockholm, 10:00 (Engelska)
Opponent
Handledare
Anmärkning

At the time of the doctoral defense, the following papers were unpublished and had a status as follows: Paper 1: Manuscript. Paper 3: Manuscript.

Tillgänglig från: 2016-11-01 Skapad: 2016-10-05 Senast uppdaterad: 2025-02-20Bibliografiskt granskad
Kucerova, L., Broz, V., Arefin, B., Maaroufi, H. O., Hurychova, J., Strnad, H., . . . Theopold, U. (2016). The Drosophila Chitinase-Like Protein IDGF3 Is Involved in Protection against Nematodes and in Wound Healing. Journal of Innate Immunity, 8(2), 199-210
Öppna denna publikation i ny flik eller fönster >>The Drosophila Chitinase-Like Protein IDGF3 Is Involved in Protection against Nematodes and in Wound Healing
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2016 (Engelska)Ingår i: Journal of Innate Immunity, ISSN 1662-811X, E-ISSN 1662-8128, Vol. 8, nr 2, s. 199-210Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

Chitinase-like proteins (CLPs) of the 18 glycosyl hydrolase family retain structural similarity to chitinases but lack enzymatic activity. Although CLPs are upregulated in several human disorders that affect regenerative and inflammatory processes, very little is known about their normal physiological function. We show that an insect CLP (Drosophila imaginal disc growth factor 3, IDGF3) plays an immune-protective role during entomopathogenic nematode (EPN) infections. During these infections, nematodes force their entry into the host via border tissues, thus creating wounds. Whole-genome transcriptional analysis of nematode-infected wildtype and Idgf3 mutant larvae have shown that, in addition to the regulation of genes related to immunity and wound closure, IDGF3 represses Jak/STAT and Wingless signaling. Further experiments have confirmed that IDGF3 has multiple roles in innate immunity. It serves as an essential component required for the formation of hemolymph clots that seal wounds, and Idgf3 mutants display an extended developmental delay during wound healing. Altogether, our findings indicate that vertebrate and invertebrate CLP proteins function in analogous settings and have a broad impact on inflammatory reactions and infections. This opens the way to further genetic analysis of Drosophila IDGF3 and will help to elucidate the exact molecular context of CLP function.

Nyckelord
Chitinase-like proteins, Imaginal disc growth factor, Hemolymph clot, Wound healing, Nematode infection, Insect immunity
Nationell ämneskategori
Biologiska vetenskaper
Forskningsämne
molekylärbiologi
Identifikatorer
urn:nbn:se:su:diva-129978 (URN)10.1159/000442351 (DOI)000372510800009 ()26694862 (PubMedID)
Tillgänglig från: 2016-05-09 Skapad: 2016-05-09 Senast uppdaterad: 2022-03-23Bibliografiskt granskad
Arefin, B., Kucerova, L., Krautz, R., Kranenburg, H., Parvin, F. & Theopold, U. (2015). Apoptosis in Hemocytes Induces a Shift in Effector Mechanisms in the Drosophila Immune System and Leads to a Pro-Inflammatory State. PLOS ONE, 10(8), Article ID e0136593.
Öppna denna publikation i ny flik eller fönster >>Apoptosis in Hemocytes Induces a Shift in Effector Mechanisms in the Drosophila Immune System and Leads to a Pro-Inflammatory State
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2015 (Engelska)Ingår i: PLOS ONE, E-ISSN 1932-6203, Vol. 10, nr 8, artikel-id e0136593Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

Apart from their role in cellular immunity via phagocytosis and encapsulation, Drosophila hemocytes release soluble factors such as antimicrobial peptides, and cytokines to induce humoral responses. In addition, they participate in coagulation and wounding, and in development. To assess their role during infection with entomopathogenic nematodes, we depleted plasmatocytes and crystal cells, the two classes of hemocytes present in naive larvae by expressing proapoptotic proteins in order to produce hemocyte-free (Hml-apo, originally called Hemo(less)) larvae. Surprisingly, we found that Hml-apo larvae are still resistant to nematode infections. When further elucidating the immune status of Hml-apo larvae, we observe a shift in immune effector pathways including massive lamellocyte differentiation and induction of Toll-as well as repression of imd signaling. This leads to a pro-inflammatory state, characterized by the appearance of melanotic nodules in the hemolymph and to strong developmental defects including pupal lethality and leg defects in escapers. Further analysis suggests that most of the phenotypes we observe in Hml-apo larvae are alleviated by administration of antibiotics and by changing the food source indicating that they are mediated through the microbiota. Biochemical evidence identifies nitric oxide as a key phylogenetically conserved regulator in this process. Finally we show that the nitric oxide donor L-arginine similarly modifies the response against an early stage of tumor development in fly larvae.

Nationell ämneskategori
Biologiska vetenskaper
Forskningsämne
molekylärbiologi
Identifikatorer
urn:nbn:se:su:diva-121511 (URN)10.1371/journal.pone.0136593 (DOI)000360435500023 ()
Tillgänglig från: 2015-10-09 Skapad: 2015-10-05 Senast uppdaterad: 2022-03-23Bibliografiskt granskad
Organisationer
Identifikatorer
ORCID-id: ORCID iD iconorcid.org/0000-0003-1117-9125

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