Change search
Link to record
Permanent link

Direct link
Publications (8 of 8) Show all publications
Flotte De Pouzols, J., Subramani, A., Ashworth, E. K., Bull, J. N., Cederquist, H., Dezalay, J., . . . Stockett, M. H. (2025). Radiative cooling of the deprotonated cyan fluorescent protein chromophore anion. Physical Review A: covering atomic, molecular, and optical physics and quantum information, 111(4), Article ID 043112.
Open this publication in new window or tab >>Radiative cooling of the deprotonated cyan fluorescent protein chromophore anion
Show others...
2025 (English)In: Physical Review A: covering atomic, molecular, and optical physics and quantum information, ISSN 2469-9926, E-ISSN 2469-9934, Vol. 111, no 4, article id 043112Article in journal (Refereed) Published
Abstract [en]

An electrospray ion source has been coupled to a cryogenic electrostatic ion-beam storage ring to enable experimental studies of the fundamental properties of biomolecular ions and their reactions in the gas phase on longer timescales than with previous instruments. Using this equipment, we have measured the vibrational radiative cooling rate of the deprotonated anion of the chromophore of the cyan fluorescent protein, a color-shifted mutant of the iconic green fluorescent protein. Time-resolved dissociation rates of collisionally activated ions are first measured to benchmark a model of the dissociation rate coefficient. Storage time-dependent laser-induced dissociation rates are then measured to probe the evolution of the internal energy distribution of the stored ion ensemble. We find that significant heating of the electrosprayed ions occurs upon their extraction from the ion source, and that the radiative cooling rate is consistent with the prediction of a simple harmonic cascade model of vibrational relaxation.

National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-243570 (URN)10.1103/PhysRevA.111.043112 (DOI)001480952800003 ()2-s2.0-105003668915 (Scopus ID)
Available from: 2025-05-26 Created: 2025-05-26 Last updated: 2025-05-26Bibliographically approved
Stockett, M. H., Bull, J. N., Cederquist, H., Indrajith, S., Ji, M., Navarro-Navarrete, J. E., . . . Zhu, B. (2024). Reply to: The stabilization of cyanonaphthalene by fast radiative cooling [Letter to the editor]. Nature Communications, 15(1), Article ID 8443.
Open this publication in new window or tab >>Reply to: The stabilization of cyanonaphthalene by fast radiative cooling
Show others...
2024 (English)In: Nature Communications, E-ISSN 2041-1723, Vol. 15, no 1, article id 8443Article in journal, Letter (Refereed) Published
National Category
Physical Chemistry
Identifiers
urn:nbn:se:su:diva-236937 (URN)10.1038/s41467-024-52696-6 (DOI)001326736000008 ()39353948 (PubMedID)2-s2.0-85205528562 (Scopus ID)
Available from: 2024-12-09 Created: 2024-12-09 Last updated: 2024-12-09Bibliographically approved
Bull, J. N., Bolognesi, P., Anstöter, C. S., Ashworth, E. K., Navarro Navarrete, J. E., Zhu, B., . . . Stockett, M. H. (2023). Autoionization from the plasmon resonance in isolated 1-cyanonaphthalene . Journal of Chemical Physics, 158(24), Article ID 241101.
Open this publication in new window or tab >>Autoionization from the plasmon resonance in isolated 1-cyanonaphthalene 
Show others...
2023 (English)In: Journal of Chemical Physics, ISSN 0021-9606, E-ISSN 1089-7690, Vol. 158, no 24, article id 241101Article in journal (Refereed) Published
Abstract [en]

Polycyclic aromatic hydrocarbons have widely been conjectured to be ubiquitous in space, as supported by the recent discovery of two isomers of cyanonaphthalene, indene, and 2-cyanoindene in the Taurus molecular cloud-1 using radioastronomy. Here, the photoionization dynamics of 1-cyanonaphthalene (1-CNN) are investigated using synchrotron radiation over the = 9.0–19.5 eV range, revealing that prompt autoionization from the plasmon resonance dominates the photophysics for = 11.5–16.0 eV. Minimal photo-induced dissociation, whether originating from an excited state impulsive bond rupture or through internal conversion followed by a statistical bond cleavage process, occurs over the microsecond timescale (as limited by the experimental setup). The direct photoionization cross section and photoelectron angular distributions are simulated using an ezDyson model combining Dyson orbitals with Coulomb wave photoejection. When considering these data in conjunction with recent radiative cooling measurements on 1-CNN+, which showed that cations formed with up to 5 eV of internal energy efficiently stabilize through recurrent fluorescence, we conclude that the organic backbone of 1-CNN is resilient to photodestruction by VUV and soft XUV radiation. These dynamics may prove to be a common feature for the survival of small polycyclic aromatic hydrocarbons in space, provided that the cations have a suitable electronic structure to support recurrent fluorescence.  

National Category
Atom and Molecular Physics and Optics Physical Chemistry
Identifiers
urn:nbn:se:su:diva-221237 (URN)10.1063/5.0153058 (DOI)001017883900006 ()37347125 (PubMedID)2-s2.0-85163749724 (Scopus ID)
Available from: 2023-09-19 Created: 2023-09-19 Last updated: 2023-09-19Bibliographically approved
Lee, J. W. L., Stockett, M. H., Ashworth, E. K. K., Navarro-Navarrete, J. E., Gougoula, E., Garg, D., . . . Bull, J. N. N. (2023). Cooling dynamics of energized naphthalene and azulene radical cations. Journal of Chemical Physics, 158(17), Article ID 174305.
Open this publication in new window or tab >>Cooling dynamics of energized naphthalene and azulene radical cations
Show others...
2023 (English)In: Journal of Chemical Physics, ISSN 0021-9606, E-ISSN 1089-7690, Vol. 158, no 17, article id 174305Article in journal (Refereed) Published
Abstract [en]

Naphthalene and azulene are isomeric polycyclic aromatic hydrocarbons (PAHs) and are topical in the context of astrochemistry due to the recent discovery of substituted naphthalenes in the Taurus Molecular Cloud-1 (TMC-1). Here, the thermal- and photo-induced isomerization, dissociation, and radiative cooling dynamics of energized (vibrationally hot) naphthalene (Np+) and azulene (Az(+)) radical cations, occurring over the microsecond to seconds timescale, are investigated using a cryogenic electrostatic ion storage ring, affording molecular cloud in a box conditions. Measurement of the cooling dynamics and kinetic energy release distributions for neutrals formed through dissociation, until several seconds after hot ion formation, are consistent with the establishment of a rapid (sub-microsecond) Np+ reversible arrow Az(+) quasi-equilibrium. Consequently, dissociation by C2H2-elimination proceeds predominantly through common Az(+) decomposition pathways. Simulation of the isomerization, dissociation, recurrent fluorescence, and infrared cooling dynamics using a coupled master equation combined with high-level potential energy surface calculations [CCSD(T)/cc-pVTZ], reproduce the trends in the measurements. The data show that radiative cooling via recurrent fluorescence, predominately through the Np+ D-0 <- D-2 transition, efficiently quenches dissociation for vibrational energies up to approximate to 1 eV above dissociation thresholds. Our measurements support the suggestion that small cations, such as naphthalene, may be more abundant in space than previously thought. The strategy presented in this work could be extended to fingerprint the cooling dynamics of other PAH ions for which isomerization is predicted to precede dissociation.

Keywords
Potential energy surfaces, Chemical equilibrium, Interstellar clouds, Fluorescence, Photodissociation, Storage rings, Laser beam effects, Dissociation, Isomerization, Chemical compounds
National Category
Chemical Sciences Other Physics Topics
Identifiers
urn:nbn:se:su:diva-229808 (URN)10.1063/5.0147456 (DOI)001010685000007 ()37125715 (PubMedID)2-s2.0-85156218812 (Scopus ID)
Available from: 2024-05-28 Created: 2024-05-28 Last updated: 2024-10-15Bibliographically approved
Stockett, M. H., Bull, J. N., Cederquist, H., Indrajith, S., Ji, M., Navarro-Navarrete, J. E., . . . Zhu, B. (2023). Efficient stabilization of cyanonaphthalene by fast radiative cooling and implications for the resilience of small PAHs in interstellar clouds. Nature Communications, 14(1), Article ID 395.
Open this publication in new window or tab >>Efficient stabilization of cyanonaphthalene by fast radiative cooling and implications for the resilience of small PAHs in interstellar clouds
Show others...
2023 (English)In: Nature Communications, E-ISSN 2041-1723, Vol. 14, no 1, article id 395Article in journal (Refereed) Published
Abstract [en]

After decades of searching, astronomers have recently identified specific Polycyclic Aromatic Hydrocarbons (PAHs) in space. Remarkably, the observed abundance of cyanonaphthalene (CNN, C10H7CN) in the Taurus Molecular Cloud (TMC-1) is six orders of magnitude higher than expected from astrophysical modeling. Here, we report unimolecular dissociation and radiative cooling rate coefficients of the 1-CNN isomer in its cationic form. These results are based on measurements of the time-dependent neutral product emission rate and kinetic energy release distributions produced from an ensemble of internally excited 1-CNN+ studied in an environment similar to that in interstellar clouds. We find that Recurrent Fluorescence - radiative relaxation via thermally populated electronic excited states - efficiently stabilizes 1-CNN+, owing to a large enhancement of the electronic transition probability by vibronic coupling. Our results help explain the anomalous abundance of CNN in TMC-1 and challenge the widely accepted picture of rapid destruction of small PAHs in space.

National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-230723 (URN)10.1038/s41467-023-36092-0 (DOI)001170148000016 ()36693859 (PubMedID)2-s2.0-85146752724 (Scopus ID)
Available from: 2024-06-11 Created: 2024-06-11 Last updated: 2025-01-22Bibliographically approved
Navarro Navarrete, J. E., Bull, J. N., Cederquist, H., Indrajith, S., Ji, M., Schmidt, H. T., . . . Stockett, M. H. (2023). Experimental radiative cooling rates of a polycyclic aromatic hydrocarbon cation. Faraday discussions, 245, 352-367
Open this publication in new window or tab >>Experimental radiative cooling rates of a polycyclic aromatic hydrocarbon cation
Show others...
2023 (English)In: Faraday discussions, ISSN 1359-6640, E-ISSN 1364-5498, Vol. 245, p. 352-367Article in journal (Refereed) Published
Abstract [en]

Several small Polycyclic Aromatic Hydrocarbons (PAHs) have been identified recently in the Taurus Molecular Cloud (TMC-1) using radio telescope observations. Reproducing the observed abundances of these molecules has been a challenge for astrochemical models. Rapid radiative cooling of PAHs by Recurrent Fluorescence (RF), the emission of optical photons from thermally populated electronically excited states, has been shown to efficiently stabilize small PAHs following ionization, augmenting their resilience in astronomical environments and helping to rationalize their observed high abundances. Here, we use a novel method to experimentally determine the radiative cooling rate of the cation of 1-cyanonaphthalene (C10H7CN, 1-CNN), the neutral species of which has been identified in TMC-1. Laser-induced dissociation rates and kinetic energy release distributions of 1-CNN cations isolated in a cryogenic electrostatic ion-beam storage ring are analysed to track the time evolution of the vibrational energy distribution of the initially hot ion ensemble as it cools. The measured cooling rate is in good agreement with the previously calculated RF rate coefficient. Improved measurements and models of the RF mechanism are needed to interpret astronomical observations and refine predictions of the stabilities of interstellar PAHs.

National Category
Other Chemistry Topics
Identifiers
urn:nbn:se:su:diva-230704 (URN)10.1039/d3fd00005b (DOI)001007872300001 ()37317671 (PubMedID)2-s2.0-85158863171 (Scopus ID)
Available from: 2024-06-11 Created: 2024-06-11 Last updated: 2025-01-22Bibliographically approved
Zhu, B., Bull, J. N., Navarro Navarrete, J. E., Schmidt-May, A. F., Cederquist, H., Schmidt, H. T., . . . Stockett, M. H. (2022). Radiative cooling of polyyne anions: C4H- and C6H-. Journal of Chemical Physics, 157(17), Article ID 174308.
Open this publication in new window or tab >>Radiative cooling of polyyne anions: C4H- and C6H-
Show others...
2022 (English)In: Journal of Chemical Physics, ISSN 0021-9606, E-ISSN 1089-7690, Vol. 157, no 17, article id 174308Article in journal (Refereed) Published
Abstract [en]

Time-dependent photodetachment action spectra for the linear hydrocarbon anions C4H and C6H are investigated using the cryogenic Double ElectroStatic Ion Ring ExpEriment. The radiative cooling characteristics of these ions on the millisecond to seconds timescale are characterized by monitoring changes in their spectra as the ions cool by spontaneous infrared (IR) emission. The average cooling rates, extracted using Non-negative Matrix Factorization, are fit with 1/e lifetimes of 19 ± 2 and 3.0 ± 0.2 s for C4H and C6H, respectively. The cooling rates are successfully reproduced using a simple harmonic cascade model of IR emission. The ultraslow radiative cooling dynamics determined in this work provide important data for understanding the thermal cooling properties of linear hydrocarbon anions and for refining models of the formation and destruction mechanisms of these anions in astrochemical environments.

National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-212393 (URN)10.1063/5.0111144 (DOI)000884800300023 ()36347688 (PubMedID)
Available from: 2022-12-07 Created: 2022-12-07 Last updated: 2025-01-22Bibliographically approved
Zhu, B., Bull, J. N., Ji, M., Zettergren, H. & Stockett, M. H. (2022). Radiative cooling rates of substituted PAH ions. Journal of Chemical Physics, 157(4), Article ID 044303.
Open this publication in new window or tab >>Radiative cooling rates of substituted PAH ions
Show others...
2022 (English)In: Journal of Chemical Physics, ISSN 0021-9606, E-ISSN 1089-7690, Vol. 157, no 4, article id 044303Article in journal (Refereed) Published
Abstract [en]

The unimolecular dissociation and infrared radiative cooling rates of cationic 1-hydroxypyrene (OHPyr+, C16H10O+) and 1-bromopyrene (BrPyr+, C16H9Br+) are measured using a cryogenic electrostatic ion beam storage ring. A novel numerical approach is developed to analyze the time dependence of the dissociation rate and to determine the absolute scaling of the radiative cooling rate coefficient. The model results show that radiative cooling competes with dissociation below the critical total vibrational energies Ec = 5.39(1) eV for OHPyr+ and 5.90(1) eV for BrPyr+. These critical energies and implications for radiative cooling dynamics are important for astrochemical models concerned with energy dissipation and molecular lifecycles. The methods presented extend the utility of storage ring experiments on astrophysically relevant ions. 

Keywords
Energy dissipation, Ion beams, Life cycle, Storage rings, 1-Hydroxypyrene, Cationics, Cooling rates, Dissociation rates, Infrared radiative cooling, Numerical approaches, Radiative cooling, Scalings, Time dependence, Unimolecular dissociation, Ions
National Category
Physical Sciences
Identifiers
urn:nbn:se:su:diva-212096 (URN)10.1063/5.0089687 (DOI)000835325400006 ()35922341 (PubMedID)2-s2.0-85135431814 (Scopus ID)
Available from: 2022-12-01 Created: 2022-12-01 Last updated: 2022-12-01Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0002-0824-4208

Search in DiVA

Show all publications