Northern post-glacial lakes are significant, increasing sources of atmospheric carbon through ebullition (bubbling) of microbially-produced methane (CH₄) from sediments. Ebullitive CH₄ flux correlates strongly with temperature, reflecting that solar radiation drives emissions. However, here we show that the slope of the temperature-CH₄ flux relationship differs spatially across two post-glacial lakes in Sweden. We compared these CH₄ emission patterns with sediment microbial (metagenomic and amplicon), isotopic, and geochemical data. The temperature-associated increase in CH₄ emissions was greater in lake middles—where methanogens were more abundant—than edges, and sediment communities were distinct between edges and middles. Microbial abundances, including those of CH₄-cycling microorganisms and syntrophs, were predictive of porewater CH₄ concentrations. Results suggest that deeper lake regions, which currently emit less CH₄ than shallower edges, could add substantially to CH₄ emissions in a warmer Arctic and that CH₄ emission predictions may be improved by accounting for spatial variations in sediment microbiota.

Stable isotopes have emerged as popular study targets when investigating emission of methane (CH₄) from lakes. Yet little is known on how isotopic patterns conform to variations in emission magnitudes—a highly relevant question. Here, we present a large multiyear data set on stable isotopes of CH₄ ebullition (bubbling) from three small adjacent subarctic lakes. The δ¹³C‐CH₄ and δD‐CH₄ range from −78.4‰ to −53.1‰ and from −369.8‰ to −218.8‰, respectively, and vary greatly among the lakes. The signatures suggest dominant hydrogenotrophic methanogenesis, particularly in the deep zones, but there are also signals of seemingly acetoclastic production in some high fluxing shallow areas, possibly fueled by in situ vegetation, but in‐sediment anaerobic CH₄ oxidation cannot be ruled out as an alternative cause. The observed patterns, however, are not consistent across the lakes. Neither do they correspond to the spatiotemporal variations in the measured bubble CH₄ fluxes. Patterns of acetoclastic and hydrogenotrophic production plus oxidation demonstrate that gains and losses of sediment CH₄ are dominated by sub‐lake scale processes. The δD‐CH₄ in the bubbles was significantly different depending on measurement month, likely due to evaporation effects. On a larger scale, our isotopic data, combined with those from other lakes, show a significant difference in bubble δD‐CH₄ between postglacial and thermokarst lakes, an important result for emission inventories. Although this characteristic theoretically assists in source partitioning studies, most hypothetical future shifts in δD‐CH₄ due to high‐latitude lake area or production pathway are too small to lead to atmospheric changes detectable with current technology.

Aquatic ecosystems are major sources of greenhouse gases (GHGs). Robust measurements of natural GHG emissions are vital for evaluating regional to global carbon budgets and for assessing climate feedbacks of natural emissions to improve climate models. Diffusive and ebullitive (bubble) transport are two major pathways of gas release from surface waters. To capture the high temporal variability of these fluxes in a well-defined footprint, we designed and built an inexpensive device that includes an easily mobile diffusive flux chamber and a bubble counter all in one. In addition to automatically collecting gas samples for subsequent various analyses in the laboratory, this device also utilized a low-cost carbon dioxide (CO2) sensor (SenseAir, Sweden) and methane (CH4) sensor (Figaro, Japan) to measure GHG fluxes. Each of the devices was equipped with an XBee module to enable local radio communication (DigiMesh network) for time synchronization and data readout at a server controller station on the lakeshore. The software of this server controller was operated on a lowcost computer (Raspberry Pi), which has a 3G connection for remote control and monitor functions from anywhere in the world. This study shows the potential of a low-cost automatic sensor network system for studying GHG fluxes on lakes in remote locations.

Lake emissions of the climate forcing trace gas methane (CH4) are spatiotemporally variable, but biases in flux measurements arising from undersampling are poorly quantified. We use a multiyear data set (2009-2017) of ice-free CH(4)emissions from three subarctic lakes obtained with bubble traps (n = 14,677), floating chambers (n = 1,306), and surface concentrations plus a gas transfer model (n = 535) to quantify these biases and evaluate corrections. Sampling primarily in warmer summer months, as is common, overestimates the ice-free season flux by a factor 1.4-1.8. Temperature proxies based on Arrhenius functions that closely fit measured fluxes (R-2 >= 0.93) enable gap filling the colder months of the ice-free season and reduce sampling bias. Ebullition (activation energy 1.36 eV) expressed greater temperature sensitivity than diffusion (1.00 eV). Resolving seasonal and interannual variability in fluxes with proxies requires similar to 135 sampling days for ebullition, and 22 and 14 days for diffusion via models and chambers, respectively.

Arctic regions are experiencing rapid warming, leading to permafrost thaw and formation of numerous water bodies. Although small ponds in particular are considered hot spots for methane (CH4) release, long-term studies of CH4 efflux from these surfaces are rare. We have collected an extensive data set of CH4 ebullition (bubbling) measurements from eight small thaw ponds (<0.001 km(2)) with different physical and hydrological characteristics over four summer seasons, the longest set of observations from thaw ponds to date. The measured fluxes were highly variable with an average of 20.0 mg CH4 . m(-2) . day(-1) (median: 4.1 mg CH4 . m(-2) . day(-1), n = 2,063) which is higher than that of most nearby lakes. The ponds were categorized into four types based on clear and significant differences in bubble flux. We found that the amount of CH4 released as bubbles from ponds was very weakly correlated with environmental variables, like air temperature and atmospheric pressure, and was potentially more related to differences in physical characteristics of the ponds. Using our measured average daily bubble flux plus the available literature, we estimate circumpolar thaw ponds <0.001 km(2) in size to emit between 0.2 and 1.0 Tg of CH4 through ebullition. Our findings exemplify the importance of high-frequency measurements over long study periods in order to adequately capture the variability of these water bodies. Through the expansion of current spatial and temporal monitoring efforts, we can increase our ability to estimate CH4 emissions from permafrost pond ecosystems now and in the future.

Ebullition (bubbling) from climate-sensitive northern lakes remains an unconstrained source of atmospheric methane (CH4). Although the focus of many recent studies, ebullition is rarely linked to the physical characteristics of lakes. In this study we analyze the sediments of subarctic postglacial lakes and investigate how sediment properties relate to the large spatial variation in CH4 bubble flux, quantified over multiple years using bubble traps. The results show that the sediments from our lakes are rich in total organic carbon, containing 37 kg/m(3) on average. This number is roughly 40% higher than the average for yedoma deposits, which have been identified as high CH4 emitters. However, the quantity of total organic carbon is not a useful indicator of high emissions from the study lakes. Neither is the amount of CH4 in the sediment a reliable measure of ebullition potential. Instead, our data point to coarse detritus, partly from buried submerged aquatic vegetation and redeposited peat as spatial controls on fluxes, often in combination with previously established effects of incoming solar radiation and water depth. The results once again highlight the climate sensitivity of northern lakes, indicating that biological responses to warmer waters and increased energy input and heating of organic sediments during longer ice-free seasons can substantially alter future CH4 emissions.

Methane (CH4) strongly contributes to observed global warming. As natural CH4 emissions mainly originate from wet ecosystems, it is important to unravel how climate change may affect these emissions. This is especially true for ebullition (bubble flux from sediments), a pathway that has long been underestimated but generally dominates emissions. Here we show a remarkably strong relationship between CH4 ebullition and temperature across a wide range of freshwater ecosystems on different continents using multi-seasonal CH4 ebullition data from the literature. As these temperature-ebullition relationships may have been affected by seasonal variation in organic matter availability, we also conducted a controlled year-round mesocosm experiment. Here 4 degrees C warming led to 51% higher total annual CH4 ebullition, while diffusion was not affected. Our combined findings suggest that global warming will strongly enhance freshwater CH4 emissions through a disproportional increase in ebullition (6-20% per 1 degrees C increase), contributing to global warming.

Lakes and wetlands, common ecosystems of the high northern latitudes, exchange large amounts of the climate-forcing gases methane (CH4) and carbon dioxide (CO2) with the atmosphere. The magnitudes of these fluxes and the processes driving them are still uncertain, particularly for subarctic and Arctic lakes where direct measurements of CH4 and CO2 emissions are often of low temporal resolution and are rarely sustained throughout the entire year. Using the eddy covariance method, we measured surface-atmosphere exchange of CH4 and CO2 during 2.5 years in a thawed fen and a shallow lake of a subarctic peatland complex. Gas exchange at the fen exhibited the expected seasonality of a subarctic wetland with maximum CH4 emissions and CO2 uptake in summer, as well as low but continuous emissions of CH4 and CO2 throughout the snow-covered winter. The seasonality of lake fluxes differed, with maximum CO2 and CH4 flux rates recorded at spring thaw. During the ice-free seasons, we could identify surface CH4 emissions as mostly ebullition events with a seasonal trend in the magnitude of the release, while a net CO2 flux indicated photosynthetic activity. We found correlations between surface CH4 emissions and surface sediment temperature, as well as between diel CO2 uptake and diel solar input. During spring, the breakdown of thermal stratification following ice thaw triggered the degassing of both CH4 and CO2. This spring burst was observed in 2 consecutive years for both gases, with a large inter-annual variability in the magnitude of the CH4 degassing. On the annual scale, spring emissions converted the lake from a small CO2 sink to a CO2 source: 80% of total annual carbon emissions from the lake were emitted as CO2. The annual total carbon exchange per unit area was highest at the fen, which was an annual sink of carbon with respect to the atmosphere. Continuous respiration during the winter partly counteracted the fen summer sink by accounting for, as both CH4 and CO2, 33% of annual carbon exchange. Our study shows (1) the importance of overturn periods (spring or fall) for the annual CH4 and CO2 emissions of northern lakes, (2) the significance of lakes as atmospheric carbon sources in subarctic landscapes while fens can be a strong carbon sink, and (3) the potential for ecosystem-scale eddy covariance measurements to improve the understanding of short-term processes driving lake-atmosphere exchange of CH4 and CO2.

Methane emissions from lakes are widely thought to be highly irregular and difficult to quantify with anything other than numerous distributed measurement stations and long-term sampling campaigns. In spite of this, a large majority of the study sites north of 50°N have been measured over surprisingly short time periods of only one to a few days. Using long-term data from three intensively studied small subarctic lakes, we recommend that measurements of diffusive methane flux and ebullition should be made over at least 11 and 39 days scattered throughout the ice-free season using depth-stratified sampling at 3 and 11 or more locations, respectively. We further show that low temporal and spatial resolutions are unlikely to cause overestimates. Therefore, we argue that most sites measured previously are likely underestimated in terms of emission potential. Avoiding these biases seen in much of the contemporary data is crucial to further constrain large-scale methane emissions from northern lakes and ponds.

Lakes and ponds represent one of the largest natural sources of the greenhouse gas methane. By surface area, almost half of these waters are located in the boreal region and northwards. A synthesis of measurements of methane emissions from 733 lakes and ponds north of ~50° N, combined with new inventories of inland waters, reveals that emissions from these high latitudes amount to around 16.5 Tg CH₄ yr⁻¹ (12.4 Tg CH₄-C yr⁻¹). This estimate — from lakes and ponds alone — is equivalent to roughly two-thirds of the inverse model calculation of all natural methane sources in the region. Thermokarst water bodies have received attention for their high emission rates, but we find that post-glacial lakes are a larger regional source due to their larger areal extent. Water body depth, sediment type and ecoclimatic region are also important in explaining variation in methane fluxes. Depending on whether warming and permafrost thaw cause expansion or contraction of lake and pond areal coverage, we estimate that annual water body emissions will increase by 20–54% before the end of the century if ice-free seasons are extended by 20 days. We conclude that lakes and ponds are a dominant methane source at high northern latitudes.