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Papapetrou, PanagiotisORCID iD iconorcid.org/0000-0002-4632-4815
Publications (10 of 127) Show all publications
Kreuzer, T., Papapetrou, P. & Zdravkovic, J. (2025). A Meta-model for Integrating Explainable Forecasting with Digital Twins. In: Jānis Grabis; Yves Wautelet (Ed.), Advanced Information Systems Engineering Workshops: CAiSE 2025 Workshops, Vienna, Austria, June 16–20, 2025, Proceedings. Paper presented at 37th International Conference on Advanced Information Systems Engineering (CAiSE 2025), Vienna, Austria, June 16-20, 2025 (pp. 169-180). Cham: Springer
Open this publication in new window or tab >>A Meta-model for Integrating Explainable Forecasting with Digital Twins
2025 (English)In: Advanced Information Systems Engineering Workshops: CAiSE 2025 Workshops, Vienna, Austria, June 16–20, 2025, Proceedings / [ed] Jānis Grabis; Yves Wautelet, Cham: Springer, 2025, p. 169-180Conference paper, Published paper (Refereed)
Abstract [en]

Digital twins are virtual replicas of their physical counterparts, providing real-time monitoring and decision-making capabilities. By integrating forecasting-based methods, the potential of digital twins can be augmented significantly, enabling them to execute advanced predictive tasks. However, with digital twins typically involving a human-in-the-loop, the need for explainability becomes crucial for understanding how and why a forecast was made. To effectively integrate explainability methods, forecasting methods, and digital twins, it is essential to define the relations between these components in a structured manner. In this work, we address this issue by providing a meta-model for the integration of explainable forecasting methods with digital twins. We evaluate our meta-model in the context of a smart building digital twin with multiple forecasting and explainability methods. The evaluation demonstrates the inherent trade-off between providing explanations and generating accurate forecasts in this context.

Place, publisher, year, edition, pages
Cham: Springer, 2025
Series
Lecture Notes in Business Information Processing, ISSN 1865-1348, E-ISSN 1865-1356 ; 556
Keywords
Digital Twin, Meta-modeling, Explainability, Forecasting
National Category
Computer Sciences
Research subject
Computer Science
Identifiers
urn:nbn:se:su:diva-246112 (URN)10.1007/978-3-031-94931-9_14 (DOI)2-s2.0-105009219179 (Scopus ID)978-3-031-94930-2 (ISBN)978-3-031-94931-9 (ISBN)
Conference
37th International Conference on Advanced Information Systems Engineering (CAiSE 2025), Vienna, Austria, June 16-20, 2025
Available from: 2025-08-27 Created: 2025-08-27 Last updated: 2025-08-28Bibliographically approved
Rugolon, F., Randl, K. R., Bampa, M. & Papapetrou, P. (2025). A Workflow for Creating Multimodal Machine Learning Models for Metastasis Predictions in Melanoma Patients. In: Rosa Meo; Fabrizio Silvestri (Ed.), Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV. Paper presented at International Workshops of ECML PKDD 2023, 18-22 September 2023, Turin, Italy. (pp. 87-102). Springer Nature
Open this publication in new window or tab >>A Workflow for Creating Multimodal Machine Learning Models for Metastasis Predictions in Melanoma Patients
2025 (English)In: Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV / [ed] Rosa Meo; Fabrizio Silvestri, Springer Nature , 2025, p. 87-102Conference paper, Published paper (Refereed)
Abstract [en]

Melanoma is the most common form of skin cancer, responsible for thousands of deaths annually. Novel therapies have been developed, but metastases are still a common problem, increasing the mortality rate and decreasing the quality of life of those who experience them. As traditional machine learning models for metastasis prediction have been limited to the use of a single modality, in this study we aim to explore and compare different unimodal and multimodal machine learning models to predict the onset of metastasis in melanoma patients to help clinicians focus their attention on patients at a higher risk of developing metastasis, increasing the likelihood of an earlier diagnosis.

We use a patient cohort derived from an Electronic Health Record, and we consider various modalities of data, including static, time series, and clinical text. We formulate the problem and propose a multimodal ML workflow for predicting the onset of metastasis in melanoma patients. We evaluate the performance of the workflow based on various classification metrics and statistical significance. The experimental findings suggest that multimodal models outperform the unimodal ones, demonstrating the potential of multimodal ML to predict the onset of metastasis.

Place, publisher, year, edition, pages
Springer Nature, 2025
Series
Communications in Computer and Information Science (CCIS), ISSN 1865-0929, E-ISSN 1865-0937 ; 2136
Keywords
Multimodal predictions, Machine learning, Melanoma, Metastasis, EHR
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-237873 (URN)10.1007/978-3-031-74640-6_7 (DOI)2-s2.0-85215966676 (Scopus ID)978-3-031-74640-6 (ISBN)978-3-031-74639-0 (ISBN)
Conference
International Workshops of ECML PKDD 2023, 18-22 September 2023, Turin, Italy.
Available from: 2025-01-14 Created: 2025-01-14 Last updated: 2025-02-25Bibliographically approved
Kreuzer, T., Papapetrou, P. & Zdravkovic, J. (2025). AI Explainability Methods in Digital Twins: A Model and a Use Case. In: José Borbinha, Tiago Prince Sales, Miguel Mira Da Silva, Henderik A. Proper, Marianne Schnellmann (Ed.), Enterprise Design, Operations, and Computing: 28th International Conference, EDOC 2024, Vienna, Austria, September 10–13, 2024, Revised Selected Papers. Paper presented at 28th International Conference on Enterprise Design, Operations, and Computing (EDOC 2024), Vienna, Austria, September 10-13, 2024 (pp. 3-20). Cham: Springer
Open this publication in new window or tab >>AI Explainability Methods in Digital Twins: A Model and a Use Case
2025 (English)In: Enterprise Design, Operations, and Computing: 28th International Conference, EDOC 2024, Vienna, Austria, September 10–13, 2024, Revised Selected Papers / [ed] José Borbinha, Tiago Prince Sales, Miguel Mira Da Silva, Henderik A. Proper, Marianne Schnellmann, Cham: Springer, 2025, p. 3-20Conference paper, Published paper (Refereed)
Abstract [en]

Digital twin systems can benefit from the integration of artificial intelligence (AI) algorithms for providing for example some predictive capabilities or supporting internal decision-making. As AI algorithms are often opaque, it becomes necessary to explain their decisions to a human operator working with the digital twin. In this study, we investigate the integration of explainable AI techniques with digital twins, which we termed XAI-DT system. We define the concept of XAI-DT system and provide a use case in smart buildings, where explainable AI is used to forecast CO2 concentration. Further, we present a core architectural model for our digital twin, outlining its interaction with the smart building and its internal processing. We evaluate five AI algorithms and compare their explainability for the operator and the entire digital twin model based on standard explainability properties from the literature.

Place, publisher, year, edition, pages
Cham: Springer, 2025
Series
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), ISSN 0302-9743, E-ISSN 1611-3349 ; 15409
National Category
Artificial Intelligence
Identifiers
urn:nbn:se:su:diva-242280 (URN)10.1007/978-3-031-78338-8_1 (DOI)2-s2.0-85219189278 (Scopus ID)978-3-031-78337-1 (ISBN)978-3-031-78338-8 (ISBN)
Conference
28th International Conference on Enterprise Design, Operations, and Computing (EDOC 2024), Vienna, Austria, September 10-13, 2024
Available from: 2025-04-22 Created: 2025-04-22 Last updated: 2025-04-22Bibliographically approved
García, D., Pérez, D., Papapetrou, P., Díaz, I., Cuadrado, A. A., Enguita, J. M. & Domínguez, M. (2025). Conditioned fully convolutional denoising autoencoder for multi-target NILM. Neural Computing & Applications, 37(17), 10491-10505
Open this publication in new window or tab >>Conditioned fully convolutional denoising autoencoder for multi-target NILM
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2025 (English)In: Neural Computing & Applications, ISSN 0941-0643, E-ISSN 1433-3058, Vol. 37, no 17, p. 10491-10505Article in journal (Refereed) Published
Abstract [en]

Energy management requires reliable tools to support decisions aimed at optimising consumption. Advances in data-driven models provide techniques like Non-Intrusive Load Monitoring (NILM), which estimates the energy demand of appliances from total consumption. Common single-target NILM approaches perform energy disaggregation by using separate learned models for each device. However, the use of single-target systems in real scenarios is computationally expensive and can obscure the interpretation of the resulting feedback. This study assesses a conditioned deep neural network built upon a Fully Convolutional Denoising AutoEncoder (FCNdAE) as multi-target NILM model. The network performs multiple disaggregations using a conditioning input that allows the specification of the target appliance. Experiments compare this approach with several single-target and multi-target models using public residential data from households and non-residential data from a hospital facility. Results show that the multi-target FCNdAE model enhances the disaggregation accuracy compared to previous models, particularly in non-residential data, and improves computational efficiency by reducing the number of trainable weights below 2 million and inference time below 0.25 s for several sequence lengths. Furthermore, the conditioning input helps the user to interpret the model and gain insight into its internal behaviour when predicting the energy demand of different appliances.

Keywords
Non-intrusive Load Monitoring, Energy Efficiency, Deep Convolutional Neural Networks, Interpretability, Multi-target NILM models
National Category
Artificial Intelligence
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-237967 (URN)10.1007/s00521-024-10552-0 (DOI)2-s2.0-85211443979 (Scopus ID)
Available from: 2025-01-16 Created: 2025-01-16 Last updated: 2025-09-08Bibliographically approved
Ho, V. L., Ho, N., Pedersen, T. B. & Papapetrou, P. (2025). Efficient Generalized Temporal Pattern Mining in Time Series Using Mutual Information. IEEE Transactions on Knowledge and Data Engineering, 37(4), 1753-1771
Open this publication in new window or tab >>Efficient Generalized Temporal Pattern Mining in Time Series Using Mutual Information
2025 (English)In: IEEE Transactions on Knowledge and Data Engineering, ISSN 1041-4347, E-ISSN 1558-2191, Vol. 37, no 4, p. 1753-1771Article in journal (Refereed) Published
Abstract [en]

Big time series are increasingly available from an ever wider range of IoT-enabled sensors deployed in various environments. Significant insights can be gained by mining temporal patterns from these time series. Temporal pattern mining (TPM) extends traditional pattern mining by adding event time intervals into extracted patterns, making them more expressive at the expense of increased time and space complexities. Besides frequent temporal patterns (FTPs), which occur frequently in the entire dataset, another useful type of temporal patterns are so-called rare temporal patterns (RTPs), which appear rarely but with high confidence. Mining rare temporal patterns yields additional challenges. For FTP mining, the temporal information and complex relations between events already create an exponential search space. For RTP mining, the support measure is set very low, leading to a further combinatorial explosion and potentially producing too many uninteresting patterns. Thus, there is a need for a better approach to mine frequent and rare temporal patterns. This paper presents our Generalized Temporal Pattern Mining from Time Series (GTPMfTS) approach that can mine both types of patterns, with the following specific contributions: (1) The end-to-end GTPMfTS process taking time series as input and producing frequent/rare temporal patterns as output. (2) The efficient Generalized Temporal Pattern Mining (GTPM) algorithm mines frequent and rare temporal patterns using efficient data structures for fast retrieval of events and patterns during the mining process, and employs effective pruning techniques for significantly faster mining. (3) An approximate version of GTPM that uses mutual information, a measure of data correlation, to prune unpromising time series from the search space. (4) An extensive experimental evaluation of GTPM for rare temporal pattern mining (RTPM) and frequent temporal pattern mining (FTPM), showing that RTPM and FTPM significantly outperform the baselines on runtime and memory consumption, and can scale to big datasets. The approximate RTPM is up to one order of magnitude, and the approximate FTPM is up to two orders of magnitude, faster than the baselines, while retaining high accuracy.

Keywords
Mutual Information, Rare Temporal Patterns, Temporal Pattern Mining, Time Series
National Category
Computer Sciences
Identifiers
urn:nbn:se:su:diva-240396 (URN)10.1109/TKDE.2025.3526800 (DOI)001439548100028 ()2-s2.0-86000437128 (Scopus ID)
Available from: 2025-03-10 Created: 2025-03-10 Last updated: 2025-04-08Bibliographically approved
Lakes, A., Velez Quintero, L. E. & Papapetrou, P. (2025). EXTREMUM: A Web-Based Tool to Generate and Explore Counterfactual Explanations on Tabular and Time-Series Data. In: Inês Dutra, Mykola Pechenizkiy, Paulo Cortez, Sepideh Pashami, Arian Pasquali, Nuno Moniz, Alípio M. Jorge, Carlos Soares, Pedro H. Abreu, João Gama (Ed.), Machine Learning and Knowledge Discovery in Databases. Applied Data Science Track and Demo Track: European Conference, ECML PKDD 2025, Porto, Portugal, September 15–19, 2025, Proceedings, Part X. Paper presented at ECML PKDD 2025, Porto, Portugal, September 15–19, 2025. (pp. 491-496). Springer Nature
Open this publication in new window or tab >>EXTREMUM: A Web-Based Tool to Generate and Explore Counterfactual Explanations on Tabular and Time-Series Data
2025 (English)In: Machine Learning and Knowledge Discovery in Databases. Applied Data Science Track and Demo Track: European Conference, ECML PKDD 2025, Porto, Portugal, September 15–19, 2025, Proceedings, Part X / [ed] Inês Dutra, Mykola Pechenizkiy, Paulo Cortez, Sepideh Pashami, Arian Pasquali, Nuno Moniz, Alípio M. Jorge, Carlos Soares, Pedro H. Abreu, João Gama, Springer Nature , 2025, p. 491-496Conference paper, Published paper (Refereed)
Abstract [en]

There is an increasing need to include explainability on the machine learning (ML) models. Among the various approaches, counterfactual (CF) explanations allow the design of what-if scenarios and the interactive exploration of ML model behavior on sensitive decision-making domains. However, the generation of CF for tabular and time-series data requires technical skills that are not always available to the end-users of ML-powered systems. Therefore, we propose a modular web-based tool to easily generate, visualize, and interact with CF on any tabular or time-series dataset. The EXTREMUM platform provides access to state-of-the-art CF algorithms, where users can train ML models and explore CF on their tabular or time-series datasets with an intuitive user interface. The project is instantiated on two tabular datasets within healthcare and five time-series datasets with various domains. The open-source repository lets ML researchers adapt the existing ML tool to new application domains: https://gitea.dsv.su.se/DataScienceGroup/EXTREMUM-demo.

Place, publisher, year, edition, pages
Springer Nature, 2025
Series
Lecture Notes in Computer Science (LNCS), ISSN 0302-9743, E-ISSN 1611-3349 ; 16022
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-248241 (URN)10.1007/978-3-032-06129-4_37 (DOI)2-s2.0-105020012832 (Scopus ID)978-3-032-06129-4 (ISBN)978-3-032-06128-7 (ISBN)
Conference
ECML PKDD 2025, Porto, Portugal, September 15–19, 2025.
Available from: 2025-10-20 Created: 2025-10-20 Last updated: 2025-11-06Bibliographically approved
Kuratomi Hernandez, A., Lee, Z., Tsaparas, P., Pitoura, E., Lindgren, T., Chaliane Junior, G. D. & Papapetrou, P. (2025). Subgroup fairness based on shared counterfactuals. Knowledge and Information Systems
Open this publication in new window or tab >>Subgroup fairness based on shared counterfactuals
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2025 (English)In: Knowledge and Information Systems, ISSN 0219-1377, E-ISSN 0219-3116Article in journal (Refereed) Epub ahead of print
Abstract [en]

CounterFair is a group counterfactual search algorithm that detects and minimizes biases among sensitive groups and identifies relevant subgroups inside these sensitive groups based on shared counterfactual instances. We investigate the latter capability, analyzing the found subgroups from the perspective of fairness based on counterfactual reasoning, in order to evaluate whether they present different biases with respect to each other and to the sensitive feature groups they belong to. We perform these measurements on the subgroups extracted by CounterFair over six binary classification datasets, providing figures and their respective analysis on the presence of bias.

Keywords
Bias, Counterfactual, Explainability, Fairness, Subgroups
National Category
Human Computer Interaction
Identifiers
urn:nbn:se:su:diva-247063 (URN)10.1007/s10115-025-02555-7 (DOI)001551587300001 ()2-s2.0-105013550551 (Scopus ID)
Available from: 2025-09-25 Created: 2025-09-25 Last updated: 2025-09-25
Kreuzer, T., Zdravkovic, J. & Papapetrou, P. (2025). Unpacking the trend: decomposition as a catalyst to enhance time series forecasting models. Data mining and knowledge discovery, 39(5), Article ID 54.
Open this publication in new window or tab >>Unpacking the trend: decomposition as a catalyst to enhance time series forecasting models
2025 (English)In: Data mining and knowledge discovery, ISSN 1384-5810, E-ISSN 1573-756X, Vol. 39, no 5, article id 54Article in journal (Refereed) Published
Abstract [en]

For the time series forecasting task, several state-of-the-art algorithms employ moving-average decomposition for improved accuracy. However, the potential of decomposition techniques to enhance time series forecasting methods has not been explored in detail. In this work, we comprehensively investigate the use of decomposition methods for the forecasting task, comparing different decomposition techniques and their effect on forecasting accuracy, as well as the possibility of providing model-agnostic interpretability. We rework recent forecasting models to be compatible with any decomposition technique and experimentally evaluate their effectiveness in different forecasting setups. We further propose and assess a model-agnostic framework using decomposition for interpretability. Our results show that decomposition can improve forecasting accuracy, especially for the proposed decomposition-adapted models. Additionally, we demonstrate that the architectural choices of existing forecasting models can be improved by using different decomposition blocks internally. We found that decomposition techniques must be configured with a low number of components to provide model-agnostic interpretability. Our work concludes that decomposition can enhance time series forecasting algorithms, improving both their performance and interpretability.

Keywords
Decomposition, Explainable AI, Machine learning, Time series forecasting
National Category
Artificial Intelligence
Identifiers
urn:nbn:se:su:diva-245557 (URN)10.1007/s10618-025-01120-8 (DOI)001531984900002 ()2-s2.0-105011168645 (Scopus ID)
Available from: 2025-08-14 Created: 2025-08-14 Last updated: 2025-08-14Bibliographically approved
Taheri, G., Szalai, M., Habibi, M. & Papapetrou, P. (2025). Unveiling Driver Modules in Lung Cancer: A Clustering-Based Gene-Gene Interaction Network Analysis. In: Rosa Meo, Fabrizio Silvestri (Ed.), Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV. Paper presented at International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023 (pp. 41-58). Springer
Open this publication in new window or tab >>Unveiling Driver Modules in Lung Cancer: A Clustering-Based Gene-Gene Interaction Network Analysis
2025 (English)In: Machine Learning and Principles and Practice of Knowledge Discovery in Databases: International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023, Revised Selected Papers, Part IV / [ed] Rosa Meo, Fabrizio Silvestri, Springer, 2025, p. 41-58Conference paper, Published paper (Refereed)
Abstract [en]

Lung cancer, which is the leading cause of cancer-related death worldwide and is characterized by genetic changes and heterogeneity, presents a significant treatment challenge. Existing approaches utilizing Machine Learning (ML) techniques for identifying driver modules lack specificity, particularly for lung cancer. This study addresses this limitation by proposing a novel method that combines gene-gene interaction network construction with ML-based clustering to identify lung cancer-specific driver modules. The methodology involves mapping biological processes to genes and constructing a weighted gene-gene interaction network to identify correlations within gene clusters. A clustering algorithm is then applied to identify potential cancer-driver modules, focusing on biologically relevant modules that contribute to lung cancer development. The results highlight the effectiveness and robustness of the clustering approach, identifying 110 unique clusters ranging in size from 4 to 10. These clusters surpass evaluation requirements and demonstrate significant relevance to critical cancer-related pathways. The identified driver modules hold promise for influencing future approaches to lung cancer diagnosis, prognosis, and treatment. This research expands our understanding of lung cancer and sets the stage for further investigations and potential clinical advancements.

Place, publisher, year, edition, pages
Springer, 2025
Series
Communications in Computer and Information Science, ISSN 1865-0929, E-ISSN 1865-0937 ; 2136 CCIS
Keywords
Driver Modules, Gene-Gene Interaction Network, Lung Cancer, Machine Learning
National Category
Bioinformatics (Computational Biology)
Identifiers
urn:nbn:se:su:diva-240214 (URN)10.1007/978-3-031-74640-6_4 (DOI)2-s2.0-85216025737 (Scopus ID)9783031746390 (ISBN)
Conference
International Workshops of ECML PKDD 2023, Turin, Italy, September 18–22, 2023
Available from: 2025-03-06 Created: 2025-03-06 Last updated: 2025-03-06Bibliographically approved
Miliou, I., Piatkowski, N. & Papapetrou, P. (Eds.). (2024). Advances in Intelligent Data Analysis XXII: 22nd International Symposium on Intelligent Data Analysis, IDA 2024, Stockholm, Sweden, April 24–26, 2024, Proceedings, Part I (1ed.). Springer Nature
Open this publication in new window or tab >>Advances in Intelligent Data Analysis XXII: 22nd International Symposium on Intelligent Data Analysis, IDA 2024, Stockholm, Sweden, April 24–26, 2024, Proceedings, Part I
2024 (English)Conference proceedings (editor) (Other academic)
Place, publisher, year, edition, pages
Springer Nature, 2024. p. 268 Edition: 1
Series
Lecture Notes in Computer Science (LNCS), ISSN 0302-9743, E-ISSN 1611-3349
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
urn:nbn:se:su:diva-228399 (URN)10.1007/978-3-031-58547-0 (DOI)978-3-031-58546-3 (ISBN)978-3-031-58547-0 (ISBN)
Available from: 2024-04-16 Created: 2024-04-16 Last updated: 2024-04-17Bibliographically approved
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Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0002-4632-4815

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