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Alsberg, Tomas
Publications (10 of 33) Show all publications
Smirnova, A., Wincent, E., Vikström Bergander, L., Alsberg, T., Bergman, J., Rannug, A. & Rannug, U. (2016). Evidence for New Light-Independent Pathways for Generation of the Endogenous Aryl Hydrocarbon Receptor Agonist FICZ. Chemical Research in Toxicology, 29(1), 75-86
Open this publication in new window or tab >>Evidence for New Light-Independent Pathways for Generation of the Endogenous Aryl Hydrocarbon Receptor Agonist FICZ
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2016 (English)In: Chemical Research in Toxicology, ISSN 0893-228X, E-ISSN 1520-5010, Vol. 29, no 1, p. 75-86Article in journal (Refereed) Published
Abstract [en]

Activation of the aryl hydrocarbon receptor (AhR), a conserved transcription factor best known as a target for highly toxic halogenated substances such as dioxin, under normal xenobiotic-free conditions is of considerable scientific interest. We have demonstrated previously that a photoproduct of tryptophan, 6-formylindolo[3,2-b]carbazole (FICZ), fulfills the criteria for an endogenous ligand for this receptor and proposed that this compound is the enigmatic mediator of the physiological functions of AhR. Here, we describe novel light-independent pathways by which FICZ can be formed. The oxidant H2O2 was shown to convert tryptophan to FICZ on its own in the absence of light. The enzymatic deamination of tryptamine yielded indole-3-acetaldehyde (I3A), which then rearranged to FICZ and its oxidation product, indolo[3,2-b]carbazole-6-carboxylic acid (CICZ). Indole-3-pyruvate (I3P) also produced I3A, FICZ, and CICZ. Malassezia yeast species, which constitute a part of the normal skin microbiota, produce a number of AhR activators from tryptophan. We identified both FICZ and CICZ among those products. Formation of FICZ from tryptophan or I3P produces a complex mixture of indole derivatives, some of which are CYP1A1 inhibitors. These can hinder the cellular clearance of FICZ and thereby increase its power as an AhR agonist. We present a general molecular mechanism involving dehydrogenations and oxidative coupling for the formation of FICZ in which I3A is the important precursor. In conclusion, our results suggest that FICZ is likely to be formed systemically.

National Category
Chemical Sciences Medicinal Chemistry
Identifiers
urn:nbn:se:su:diva-126761 (URN)10.1021/acs.chemrestox.5b00416 (DOI)000368562400008 ()26686552 (PubMedID)
Available from: 2016-06-29 Created: 2016-02-15 Last updated: 2022-02-23Bibliographically approved
Bogdal, C., Alsberg, T., Diefenbacher, P. S., MacLeod, M. & Berger, U. (2015). Fast Quantification of Chlorinated Paraffins in Environmental Samples by Direct Injection High-Resolution Mass Spectrometry with Pattern Deconvolution. Analytical Chemistry, 87(5), 2852-2860
Open this publication in new window or tab >>Fast Quantification of Chlorinated Paraffins in Environmental Samples by Direct Injection High-Resolution Mass Spectrometry with Pattern Deconvolution
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2015 (English)In: Analytical Chemistry, ISSN 0003-2700, E-ISSN 1520-6882, Vol. 87, no 5, p. 2852-2860Article in journal (Refereed) Published
Abstract [en]

Chlorinated paraffins (CPs) are high production volume chemicals, but data about their environmental fate are scarce. CP mixtures composed of thousands of isomers represent a major challenge for quantification at low levels in environmental samples. Here, we present a novel analytical method for analysis of short-chain, medium-chain, and long-chain CPs in a single injection, that also yields information about congener group pattern. Our detection method is based on direct injection into an atmospheric pressure chemical ionization source operated in negative ion mode under chlorine-enhanced conditions, followed by quadrupole time-of-flight high-resolution mass spectrometry (APCI-qTOF-HRMS) operated in full-scan mode. A mathematical algorithm is applied to deconvolute the CP patterns in the analyzed samples into a linear combination of patterns of technical CP mixtures and to quantify CPs using technical mixtures as external calibration standards. For CP mixtures with known composition, the new method provided concentrations that were within a factor of 1.2 of the target value. Accuracies for CPs spiked to sediment and fish extracts were between 91% and 123%. Concentrations determined in unspiked field samples were within a factor of 5 for short-chain CPs and a factor of 16 for medium-chain CPs of results obtained with an independent method based on gas chromatography/electron capture negative ionization high-resolution mass spectrometry (GC/ECNI-HRMS). The presented APCI-qTOF-HRMS pattern deconvolution method is an interesting alternative for CP analysis in environmental samples. It is particularly sensitive for medium- and long-chain CPs and has the advantage of being extremely fast (instrumental analysis time, less than 1 min).

National Category
Analytical Chemistry
Identifiers
urn:nbn:se:su:diva-116629 (URN)10.1021/ac504444d (DOI)000350611700049 ()25668073 (PubMedID)
Note

AuthorCount:5;

Available from: 2015-04-27 Created: 2015-04-22 Last updated: 2022-02-23Bibliographically approved
Yuan, B., Alsberg, T., Bogdal, C., MacLeod, M. & de Wit, C. (2015). Modelling isotopic peak distributions of chlorinated paraffins homologue groups in high resolution mass spectrometry in soft ionization modes. In: : . Paper presented at International Symposium on Halogenated Persistent Organic Pollutants 35th Annual Meeting, Dioxin 2015, Sao Paolo, Brazil, 23-28 August 2015.
Open this publication in new window or tab >>Modelling isotopic peak distributions of chlorinated paraffins homologue groups in high resolution mass spectrometry in soft ionization modes
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2015 (English)Conference paper, Oral presentation only (Other academic)
National Category
Environmental Sciences
Identifiers
urn:nbn:se:su:diva-126475 (URN)
Conference
International Symposium on Halogenated Persistent Organic Pollutants 35th Annual Meeting, Dioxin 2015, Sao Paolo, Brazil, 23-28 August 2015
Available from: 2016-02-03 Created: 2016-02-03 Last updated: 2022-02-23Bibliographically approved
Westberg, E., Hedebrant, U., Haglund, J., Alsberg, T., Eriksson, J., Seidel, A. & Törnqvist, M. (2014). Conditions for sample preparation and quantitative HPLC/MS-MS analysis of bulky adducts to serum albumin with diolepoxides of polycyclic aromatic hydrocarbons as models. Analytical and Bioanalytical Chemistry, 406(5), 1519-1530
Open this publication in new window or tab >>Conditions for sample preparation and quantitative HPLC/MS-MS analysis of bulky adducts to serum albumin with diolepoxides of polycyclic aromatic hydrocarbons as models
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2014 (English)In: Analytical and Bioanalytical Chemistry, ISSN 1618-2642, E-ISSN 1618-2650, Vol. 406, no 5, p. 1519-1530Article in journal (Refereed) Published
Abstract [en]

Stable adducts to serum albumin (SA) from electrophilic and genotoxic compounds/metabolites can be used as biomarkers for quantification of the corresponding in vivo dose. In the present study, conditions for specific analysis of stable adducts to SA formed from carcinogenic polycyclic aromatic hydrocarbons (PAH) were evaluated in order to achieve a sensitive and reproducible quantitative method. Bulky adducts from diolepoxides (DE) of PAH, primarily DE of benzo[a]pyrene (BPDE) and also DE of dibenzo[a,l]pyrene (DBPDE) and dibenzo[a,h]anthracene (DBADE), were used as model compounds. The alkylated peptides obtained after enzymatic hydrolysis of human SA modified with the different PAHDE were principally PAHDE-His-Pro, PAHDE-His-Pro-Tyr and PAHDE-Lys. Alkaline hydrolysis under optimised conditions gave the BPDE-His as the single analyte of alkylated His, but also indicated degradation of this adduct. It was not possible to obtain the BPDE-His as one analyte from BPDE-alkylated SA through modifications of the enzymatic hydrolysis. The BPDE-His adduct was shown to be stable during the weak acidic conditions used in the isolation of SA. Enrichment by HPLC or SPE, but not butanol extraction, gave good recovery, using Protein LoBind tubes. A simple internal standard (IS) approach using SA modified with other PAHDE as IS was shown to be applicable. A robust analytical procedure based on digestion with pronase, enrichment by HPLC or SPE, and analysis with HPLC/MS-MS electrospray ionisation was achieved. A good reproducibility (coefficient of variation (CV) 11 %) was obtained, and the achieved limit of detection for the studied PAHDE, using standard instrumentation, was approximately 1 fmol adduct/mg SA analysing extract from 5 mg SA.

Keywords
Bulky serum albumin adducts, Polycyclic aromatic hydrocarbons, Extraction (SPE vertical bar HPLC vertical bar butanol), Diol epoxides, Mass Spectrometry, Hydrolysis (pronase enzymatic vertical bar alkaline)
National Category
Biochemistry Molecular Biology
Identifiers
urn:nbn:se:su:diva-102079 (URN)10.1007/s00216-013-7540-7 (DOI)000331004700023 ()
Funder
Formas
Note

AuthorCount:7;

Funding agencies:

European Commission, QLK4-CT-2002-02402; Swedish Research Council FORMAS;    Swedish Cancer and Allergy Foundation 

Available from: 2014-03-27 Created: 2014-03-26 Last updated: 2025-02-20Bibliographically approved
McLachlan, M. S., Kierkegaard, A., Radke, M., Sobek, A., Malmvärn, A., Alsberg, T., . . . Xu, S. (2014). Using Model-Based Screening to Help Discover Unknown Environmental Contaminants. Environmental Science and Technology, 48(13), 7264-7271
Open this publication in new window or tab >>Using Model-Based Screening to Help Discover Unknown Environmental Contaminants
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2014 (English)In: Environmental Science and Technology, ISSN 0013-936X, E-ISSN 1520-5851, Vol. 48, no 13, p. 7264-7271Article in journal (Refereed) Published
Abstract [en]

Of the tens of thousands of chemicals in use, only a small fraction have been analyzed in environmental samples. To effectively identify environmental contaminants, methods to prioritize chemicals for analytical method development are required. We used a high-throughput model of chemical emissions, fate, and bioaccumulation to identify chemicals likely to have high concentrations in specific environmental media, and we prioritized these for target analysis. This model-based screening was applied to 215 organosilicon chemicals culled from industrial chemical production statistics. The model-based screening prioritized several recognized organosilicon contaminants and generated hypotheses leading to the selection of three chemicals that have not previously been identified as potential environmental contaminants for target analysis. Trace analytical methods were developed, and the chemicals were analyzed in air, sewage sludge, and sediment. All three substances were found to be environmental contaminants. Phenyl-tris(trimethylsiloxy)silane was present in all samples analyzed, with concentrations of similar to 50 pg m(-3) in Stockholm air and similar to 0.5 ng g(-1) dw in sediment from the Stockholm archipelago. Tris(trifluoropropyl)trimethyl-cyclotrisiloxane and tetrakis(trifluoropropyl)tetramethyl-cyclotetrasiloxane were found in sediments from Lake Mjosa at similar to 1 ng g(-1) dw. The discovery of three novel environmental contaminants shows that models can be useful for prioritizing chemicals for exploratory assessment.

National Category
Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-106580 (URN)10.1021/es5010544 (DOI)000338488700011 ()
Note

AuthorCount:11;

Available from: 2014-08-14 Created: 2014-08-12 Last updated: 2025-02-07Bibliographically approved
Ullah, S., Alsberg, T., Vestergren, R. & Berger, U. (2012). Determination of perfluoroalkyl carboxylic, sulfonic, and phosphonic acids in food. Analytical and Bioanalytical Chemistry, 404(8), 2193-2201
Open this publication in new window or tab >>Determination of perfluoroalkyl carboxylic, sulfonic, and phosphonic acids in food
2012 (English)In: Analytical and Bioanalytical Chemistry, ISSN 1618-2642, E-ISSN 1618-2650, Vol. 404, no 8, p. 2193-2201Article in journal (Refereed) Published
Abstract [en]

A sensitive and accurate method was developed and validated for simultaneous analysis of perfluoroalkyl carboxylic acids, sulfonic acids, and phosphonic acids (PFPAs) at low picograms per gram concentrations in a variety of food matrices. The method employed extraction with acetonitrile/water and cleanup on a mixed-mode co-polymeric sorbent (C8 + quaternary amine) using solid-phase extraction. High-performance liquid chromatographic separation was achieved on a C18 column using a mobile phase gradient containing 5 mM 1-methyl piperidine for optimal chromatographic resolution of PFPAs. A quadrupole time-of-flight high-resolution mass spectrometer operating in negative ion mode was used as detector. Method detection limits were in the range of 0.002 to 0.02 ng g(-1) for all analytes. Sample preparation (extraction and cleanup) recoveries at a spiking level of 0.1 ng g(-1) to a baby food composite were in the range of 59 to 98 %. A strong matrix effect was observed in the analysis of PFPAs in food extracts, which was tentatively assigned to sorption of PFPAs to the injection vial in the solvent-based calibration standard. The method was successfully applied to a range of different food matrices including duplicate diet samples, vegetables, meat, and fish samples.

Keywords
PFCAs, PFSAs, PFPAs, Food samples, HPLC, HRMS
National Category
Biochemistry Molecular Biology
Research subject
Applied Environmental Science
Identifiers
urn:nbn:se:su:diva-83037 (URN)10.1007/s00216-012-6374-z (DOI)000310083900012 ()
Note

AuthorCount:4;

Available from: 2012-12-05 Created: 2012-12-03 Last updated: 2025-02-20Bibliographically approved
Wincent, E., Bengtsson, J., Bardbori, A. M., Alsberg, T., Luecke, S., Rannug, U. & Rannug, A. (2012). Inhibition of cytochrome P4501-dependent clearance of the endogenous agonist FICZ as a mechanism for activation of the aryl hydrocarbon receptor. Proceedings of the National Academy of Sciences of the United States of America, 109(12), 4479-4484
Open this publication in new window or tab >>Inhibition of cytochrome P4501-dependent clearance of the endogenous agonist FICZ as a mechanism for activation of the aryl hydrocarbon receptor
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2012 (English)In: Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, E-ISSN 1091-6490, Vol. 109, no 12, p. 4479-4484Article in journal (Refereed) Published
Abstract [en]

Altered systemic levels of 6-formylindolo[3,2-b]carbazole (FICZ), an enigmatic endogenous ligand for the aryl hydrocarbon receptor (AHR), may explain adverse physiological responses evoked by small natural and anthropogenic molecules as well as by oxidative stress and light. We demonstrate here that several different chemical compounds can inhibit the metabolism of FICZ, thereby disrupting the autoregulatory feedback control of cytochrome P4501 systems and other proteins whose expression is regulated by AHR. FICZ is both the most tightly bound endogenous agonist for the AHR and an ideal substrate for cytochrome CYP1A1/1A2 and 1B1, thereby also participating in an autoregulatory loop that keeps its own steady-state concentration low. At very low concentrations FICZ influences circadian rhythms, responses to UV light, homeostasis associated with pro-and anti-inflammatory processes, and genomic stability. Here, we demonstrate that, if its metabolic clearance is compromised, femtomolar background levels of this compound in cell-culture medium are sufficient to up-regulate CYP1A1 mRNA and enzyme activity. The oxidants UVB irradiation and hydrogen peroxide and the model AHR antagonist 3'-methoxy-4'-nitroflavone all inhibited induction of CYP1A1 enzyme activity by FICZ or 2,3,7,8-tetrachlorodibenzo-p-dioxin, thereby subsequently elevating intracellular levels of FICZ and activating AHR. Taken together, these findings support an indirect mechanism of AHR activation, indicating that AHR activation by molecules with low affinity actually may reflect inhibition of FICZ metabolism and raising questions about the reported promiscuity of the AHR. Accordingly, we propose that prolonged induction of AHR activity through inhibition of CYP1 disturbs feedback regulation of FICZ levels, with potential detrimental consequences.

National Category
Biochemistry Molecular Biology
Research subject
Molecular Bioscience
Identifiers
urn:nbn:se:su:diva-76144 (URN)10.1073/pnas.1118467109 (DOI)000301712600032 ()
Note

7

Available from: 2012-05-09 Created: 2012-05-09 Last updated: 2025-02-20Bibliographically approved
Minten, J., Adolfsson-Erici, M., Bjorlenius, B. & Alsberg, T. (2011). A method for the analysis of sucralose with electrospray LC/MS in recipient waters and in sewage effluent subjected to tertiary treatment technologies. International Journal of Environmental Analytical Chemistry, 91(4), 357-366
Open this publication in new window or tab >>A method for the analysis of sucralose with electrospray LC/MS in recipient waters and in sewage effluent subjected to tertiary treatment technologies
2011 (English)In: International Journal of Environmental Analytical Chemistry, ISSN 0306-7319, E-ISSN 1029-0397, Vol. 91, no 4, p. 357-366Article in journal (Refereed) Published
Abstract [en]

A method for the analysis of the artificial sweetener sucralose in sewage water and recipient water was developed. Extraction and clean up was performed with solid-phase extraction utilising Oasis HLB columns. Detection was made by liquid chromatography electrospray mass spectrometry (LC/MS). The triple-quadrupole mass spectrometer was operated in multiple reaction monitoring (MRM) mode. However, 'pseudo MRM' was used, a technique where the two quadrupoles monitor the same m/z. The sodium adduct of sucralose was used for quantification, since lower detection limits were obtained as compared to the sucralose quasi-molecular ion in negative ion mode. The two ions with highest intensity in the chlorine isotope pattern were monitored. The reduction of matrix effects with this approach is discussed. The method limit of quantification (MLOQ) for sewage water was 0.2 mu g L(-1), whereas for recipient water MLOQ was 0.02 mu g L(-1). The method was used to analyse effluent samples from an experimental sewage treatment plant (STP) to assess the efficiency of tertiary treatment techniques for removal of sucralose. Filtration through activated carbon was shown to be efficient, while ozonation, advanced oxidation techniques and membrane bioreactors were less efficient. Analyses of receiving waters showed low dilution of sucralose emitted from the STPs.

Keywords
sewage treatment, receiving waters, sodium adduct, matrix effects
National Category
Chemical Sciences Environmental Sciences Ecology
Identifiers
urn:nbn:se:su:diva-68662 (URN)10.1080/03067310903582333 (DOI)000288369000005 ()
Note
authorCount :4Available from: 2012-01-06 Created: 2012-01-04 Last updated: 2022-02-24Bibliographically approved
Minten, J., Adolfsson Erici, M. & Alsberg, T. (2011). Extraction and analysis of pharmaceuticals in pollutedsediment using liquid chromatography mass spectrometry. International Journal of Environmental Analytical Chemistry, 91(6), 553-566
Open this publication in new window or tab >>Extraction and analysis of pharmaceuticals in pollutedsediment using liquid chromatography mass spectrometry
2011 (English)In: International Journal of Environmental Analytical Chemistry, ISSN 0306-7319, E-ISSN 1029-0397, Vol. 91, no 6, p. 553-566Article in journal (Refereed) Published
Abstract [en]

A multi-residue method for the extraction and clean-up of sediment samples was developed for the analysis of pharmaceutical residues. Sediment samples were collected in the proximity of sewage water plant in Stockholm, Sweden. Target analytes were the basic -blocker propranolol, the neutral neuroleptic carbamazepine and the acidic anticoagulant warfarin, the painkiller diclofenac and the lipid regulator gemfibrozil. The extraction solvent was optimised with regard to pH and organic modifer. Extraction and clean up were performed with liquid-liquid extraction and ultra-sonication followed by solid-phase extraction. One extraction solvent, containing acetone/McIlvaine buffer pH4, provided satisfactory extraction for all substances. LC/MSMS in the MRM mode was used for determination. The recoveries of the extraction and clean-up steps were 60–75% (2–8%) and LOQs were in the range 0.4–8 ng/g sediment (dry weight). The pharmaceuticals found in the sediment samples were propranolol and carbamazepine, representing substances with basic and neutral properties. Additionally, the samples were analysed with LC/QTOF for verification with the use of accurate mass measurement in the full-scan mode. Pharmaceuticals not represented in the original method were looked for. Non-target pharmaceuticals found using the LC/QTOF system were the basic -blocker metoprolol and the acidic painkiller naproxen.

Keywords
solid-phase extraction, multiple reaction monitoring, triple quadrupole
National Category
Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-29184 (URN)10.1080/03067311003657983 (DOI)000289404000005 ()
Available from: 2009-08-12 Created: 2009-08-12 Last updated: 2025-02-07Bibliographically approved
Ullah, S., Alsberg, T. & Berger, U. (2011). Simultaneous determination of perfluoroalkyl phosphonates, carboxylates, and sulfonates in drinking water. Journal of Chromatography A, 1218(37), 6388-6395
Open this publication in new window or tab >>Simultaneous determination of perfluoroalkyl phosphonates, carboxylates, and sulfonates in drinking water
2011 (English)In: Journal of Chromatography A, ISSN 0021-9673, E-ISSN 1873-3778, Vol. 1218, no 37, p. 6388-6395Article in journal (Refereed) Published
Abstract [en]

A trace analytical method based on high performance liquid chromatography coupled to quadrupole time-of-flight high resolution mass spectrometry was developed for simultaneous determination of perfluoroalkyl phosphonates (PFPAs, carbon chain lengths C6,8,10), perfluoroalkyl carboxylates (PFCAs. C5-12), and perfluoroalkyl sulfonates (PFSAs. C4,6,8,10) in drinking water (tap water). Analytes were enriched on a mixed mode co-polymeric sorbent (C8 + quaternary amine) using solid phase extraction. Chromatographic separation was achieved on a Zorbax Extend C18 reversed phase column using a mobile phase gradient consisting of water, methanol, and acetonitrile containing 2 mM ammonium acetate and 5 mM 1-methyl piperidine. The mass spectrometer was operated in electrospray negative ion mode. Use of 1-methyl piperidine in the mobile phase resulted in a significant increase in instrument sensitivity for PFPAs through improved chromatographic resolution, background suppression, and increased ionization efficiency. Method detection limits for extraction of 500 mL tap water were in the ranges of 0.095-0.17 ng/L, 0.027-0.17 ng/L, and 0.014-0.052 ng/L for PFPAs. PFCAs, and PFSAs, respectively. Whole method recoveries at a spiking level of 0.5 ng/L to 500 mL HPLC grade water were 40-56%, 56-97%, and 55-77% for PFPAs, PFCAs. and PFSAs, respectively. A matrix effect (signal enhancement) was observed in the detection of PFPAs in tap water extracts, leading to calculated recoveries of 249-297% at a 0.5 ng/L spiking level. This effect resulted in an additional improvement of method sensitivity for PFPAs. To compensate for the matrix effect. PFPAs in tap water were quantified using matrix-matched and extracted calibration standards. The method was successfully applied to the analysis of drinking water collected from six European countries. PFPAs were not detected except for perfluorooctyl phosphonate (PFOPA) at close to the detection limit of 0.095 ng/L in two water samples from Amsterdam, the Netherlands. Highest levels were found for perfluorobutane sulfonate (PFBS, 18.8 ng/L) and perfluorooctanoate (PFOA, 8.6 ng/L) in samples from Amsterdam as well as for perfluorooctane sulfonate (PFOS, 8.8 ng/L) in tap water from Stockholm, Sweden.

Keywords
PFPAs, PFCAs, PFSAs, HPLC/HRMS, Drinking water, 1-Methyl piperidine
National Category
Natural Sciences
Research subject
Applied Environmental Science
Identifiers
urn:nbn:se:su:diva-66521 (URN)10.1016/j.chroma.2011.07.005 (DOI)000295113600020 ()
Note

authorCount :3

Available from: 2011-12-27 Created: 2011-12-20 Last updated: 2022-02-24Bibliographically approved
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