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Holm, Nils G.
Alternative names
Publications (10 of 77) Show all publications
Preiner, M., Xavier, J. C., Sousa, F. L., Zimorski, V., Neubeck, A., Lang, S. Q., . . . Martin, W. F. (2018). Serpentinization: Connecting Geochemistry, Ancient Metabolism and Industrial Hydrogenation. Life, Article ID 41.
Open this publication in new window or tab >>Serpentinization: Connecting Geochemistry, Ancient Metabolism and Industrial Hydrogenation
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2018 (English)In: Life, E-ISSN 2075-1729, article id 41Article, review/survey (Refereed) Published
Abstract [en]

Rock-water-carbon interactions germane to serpentinization in hydrothermal vents have occurred for over 4 billion years, ever since there was liquid water on Earth. Serpentinization converts iron(II) containing minerals and water to magnetite (Fe3O4) plus H-2. The hydrogen can generate native metals such as awaruite (Ni3Fe), a common serpentinization product. Awaruite catalyzes the synthesis of methane from H-2 and CO2 under hydrothermal conditions. Native iron and nickel catalyze the synthesis of formate, methanol, acetate, and pyruvate-intermediates of the acetyl-CoA pathway, the most ancient pathway of CO2 fixation. Carbon monoxide dehydrogenase (CODH) is central to the pathway and employs Ni-0 in its catalytic mechanism. CODH has been conserved during 4 billion years of evolution as a relic of the natural CO2-reducing catalyst at the onset of biochemistry. The carbide-containing active site of nitrogenase-the only enzyme on Earth that reduces N(2)is probably also a relic, a biological reconstruction of the naturally occurring inorganic catalyst that generated primordial organic nitrogen. Serpentinization generates Fe3O4 and H-2, the catalyst and reductant for industrial CO2 hydrogenation and for N-2 reduction via the Haber-Bosch process. In both industrial processes, an Fe3O4 catalyst is matured via H-2-dependent reduction to generate Fe5C2 and Fe2N respectively. Whether serpentinization entails similar catalyst maturation is not known. We suggest that at the onset of life, essential reactions leading to reduced carbon and reduced nitrogen occurred with catalysts that were synthesized during the serpentinization process, connecting the chemistry of life and Earth to industrial chemistry in unexpected ways.

Keywords
rock-water-carbon interactions, origin of life, carbides, iron sulfur, early metabolism
National Category
Biological Sciences Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-175000 (URN)10.3390/life8040041 (DOI)000455417000004 ()30249016 (PubMedID)
Available from: 2019-10-15 Created: 2019-10-15 Last updated: 2025-01-31Bibliographically approved
Kobayashi, K., Geppert, W. D., Carrasco, N., Holm, N. G., Mousis, O., Palumbo, M. E., . . . Ziurys, L. M. (2017). Laboratory Studies of Methane and Its Relationship to Prebiotic Chemistry. Astrobiology, 17(8), 786-812
Open this publication in new window or tab >>Laboratory Studies of Methane and Its Relationship to Prebiotic Chemistry
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2017 (English)In: Astrobiology, ISSN 1531-1074, E-ISSN 1557-8070, Vol. 17, no 8, p. 786-812Article, review/survey (Refereed) Published
Abstract [en]

To examine how prebiotic chemical evolution took place on Earth prior to the emergence of life, laboratory experiments have been conducted since the 1950s. Methane has been one of the key molecules in these investigations. In earlier studies, strongly reducing gas mixtures containing methane and ammonia were used to simulate possible reactions in the primitive atmosphere of Earth, producing amino acids and other organic compounds. Since Earth's early atmosphere is now considered to be less reducing, the contribution of extraterrestrial organics to chemical evolution has taken on an important role. Such organic molecules may have come from molecular clouds and regions of star formation that created protoplanetary disks, planets, asteroids, and comets. The interstellar origin of organics has been examined both experimentally and theoretically, including laboratory investigations that simulate interstellar molecular reactions. Endogenous and exogenous organics could also have been supplied to the primitive ocean, making submarine hydrothermal systems plausible sites of the generation of life. Experiments that simulate such hydrothermal systems where methane played an important role have consequently been conducted. Processes that occur in other Solar System bodies offer clues to the prebiotic chemistry of Earth. Titan and other icy bodies, where methane plays significant roles, are especially good targets. In the case of Titan, methane is both in the atmosphere and in liquidospheres that are composed of methane and other hydrocarbons, and these have been studied in simulation experiments. Here, we review the wide range of experimental work in which these various terrestrial and extraterrestrial environments have been modeled, and we examine the possible role of methane in chemical evolution.

Keywords
Methane, Interstellar environments, Submarine hydrothermal systems, Titan, Origin of life
National Category
Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-147127 (URN)10.1089/ast.2016.1492 (DOI)000407893800007 ()28727932 (PubMedID)
Available from: 2017-09-29 Created: 2017-09-29 Last updated: 2025-02-07Bibliographically approved
Ivarsson, M., Broman, C., Gustafsson, H. & Holm, N. G. (2015). Biogenic Mn-Oxides in Subseafloor Basalts. PLOS ONE, 10(6), Article ID e0128863.
Open this publication in new window or tab >>Biogenic Mn-Oxides in Subseafloor Basalts
2015 (English)In: PLOS ONE, E-ISSN 1932-6203, Vol. 10, no 6, article id e0128863Article in journal (Refereed) Published
Abstract [en]

The deep biosphere of the subseafloor basalts is recognized as a major scientific frontier in disciplines like biology, geology, and oceanography. Recently, the presence of fungi in these environments has involved a change of view regarding diversity and ecology. Here, we describe fossilized fungal communities in vugs in subseafloor basalts from a depth of 936.65 metres below seafloor at the Detroit Seamount, Pacific Ocean. These fungal communities are closely associated with botryoidal Mn oxides composed of todorokite. Analyses of the Mn oxides by Electron Paramagnetic Resonance spectroscopy (EPR) indicate a biogenic signature. We suggest, based on mineralogical, morphological and EPR data, a biological origin of the botryoidal Mn oxides. Our results show that fungi are involved in Mn cycling at great depths in the seafloor and we introduce EPR as a means to easily identify biogenic Mn oxides in these environments.

National Category
Geology
Identifiers
urn:nbn:se:su:diva-119240 (URN)10.1371/journal.pone.0128863 (DOI)000356932500031 ()
Available from: 2015-08-14 Created: 2015-08-03 Last updated: 2026-04-24Bibliographically approved
Holm, N. & Geppert, W. (2015). Introduction to a Series of Articles That Focus on Methane. Astrobiology, 15(4), 307-307
Open this publication in new window or tab >>Introduction to a Series of Articles That Focus on Methane
2015 (English)In: Astrobiology, ISSN 1531-1074, E-ISSN 1557-8070, Vol. 15, no 4, p. 307-307Article, review/survey (Refereed) Published
National Category
Physical Sciences
Identifiers
urn:nbn:se:su:diva-176221 (URN)10.1089/ast.2015.1501 (DOI)000352630200006 ()25844716 (PubMedID)2-s2.0-84927932216 (Scopus ID)
Available from: 2019-12-27 Created: 2019-12-27 Last updated: 2022-10-14Bibliographically approved
Mousis, O., Chassefiere, E., Holm, N. G., Bouquet, A., Hunter Waite, J., Geppert, W. D., . . . Rousselot, P. (2015). Methane Clathrates in the Solar System. Astrobiology, 15(4), 308-326
Open this publication in new window or tab >>Methane Clathrates in the Solar System
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2015 (English)In: Astrobiology, ISSN 1531-1074, E-ISSN 1557-8070, Vol. 15, no 4, p. 308-326Article, review/survey (Refereed) Published
Abstract [en]

We review the reservoirs of methane clathrates that may exist in the different bodies of the Solar System. Methane was formed in the interstellar medium prior to having been embedded in the protosolar nebula gas phase. This molecule was subsequently trapped in clathrates that formed from crystalline water ice during the cooling of the disk and incorporated in this form into the building blocks of comets, icy bodies, and giant planets. Methane clathrates may play an important role in the evolution of planetary atmospheres. On Earth, the production of methane in clathrates is essentially biological, and these compounds are mostly found in permafrost regions or in the sediments of continental shelves. On Mars, methane would more likely derive from hydrothermal reactions with olivine-rich material. If they do exist, martian methane clathrates would be stable only at depth in the cryosphere and sporadically release some methane into the atmosphere via mechanisms that remain to be determined. In the case of Titan, most of its methane probably originates from the protosolar nebula, where it would have been trapped in the clathrates agglomerated by the satellite's building blocks. Methane clathrates are still believed to play an important role in the present state of Titan. Their presence is invoked in the satellite's subsurface as a means of replenishing its atmosphere with methane via outgassing episodes. The internal oceans of Enceladus and Europa also provide appropriate thermodynamic conditions that allow formation of methane clathrates. In turn, these clathrates might influence the composition of these liquid reservoirs. Finally, comets and Kuiper Belt Objects might have formed from the agglomeration of clathrates and pure ices in the nebula. The methane observed in comets would then result from the destabilization of clathrate layers in the nuclei concurrent with their approach to perihelion. Thermodynamic equilibrium calculations show that methane-rich clathrate layers may exist on Pluto as well.

Keywords
Methane clathrate, Protosolar nebula, Terrestrial planets, Outer Solar System
National Category
Physical Sciences Biological Sciences Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-159593 (URN)10.1089/ast.2014.1189 (DOI)000352630200007 ()25774974 (PubMedID)2-s2.0-84927929050 (Scopus ID)
Available from: 2018-09-04 Created: 2018-09-04 Last updated: 2025-01-31Bibliographically approved
Holm, N. G., Oze, C., Mousis, O., Waite, J. H. & Guilbert-Lepoutre, A. (2015). Serpentinization and the Formation of H-2 and CH4 on Celestial Bodies (Planets, Moons, Comets). Astrobiology, 15(7), 587-600
Open this publication in new window or tab >>Serpentinization and the Formation of H-2 and CH4 on Celestial Bodies (Planets, Moons, Comets)
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2015 (English)In: Astrobiology, ISSN 1531-1074, E-ISSN 1557-8070, Vol. 15, no 7, p. 587-600Article, review/survey (Refereed) Published
Abstract [en]

Serpentinization involves the hydrolysis and transformation of primary ferromagnesian minerals such as olivine ((Mg,Fe)(2)SiO4) and pyroxenes ((Mg,Fe)SiO3) to produce H-2-rich fluids and a variety of secondary minerals over a wide range of environmental conditions. The continual and elevated production of H-2 is capable of reducing carbon, thus initiating an inorganic pathway to produce organic compounds. The production of H-2 and H-2-dependent CH4 in serpentinization systems has received significant interdisciplinary interest, especially with regard to the abiotic synthesis of organic compounds and the origins and maintenance of life in Earth's lithosphere and elsewhere in the Universe. Here, serpentinization with an emphasis on the formation of H-2 and CH4 are reviewed within the context of the mineralogy, temperature/pressure, and fluid/gas chemistry present in planetary environments. Whether deep in Earth's interior or in Kuiper Belt Objects in space, serpentinization is a feasible process to invoke as a means of producing astrobiologically indispensable H-2 capable of reducing carbon to organic compounds.

Keywords
Serpentinization, Fischer-Tropsch-type synthesis, Hydrogen formation, Methane formation, Ultramafic rocks
National Category
Astronomy, Astrophysics and Cosmology Biological Sciences Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-123359 (URN)10.1089/ast.2014.1188 (DOI)000363933700006 ()
Available from: 2015-11-25 Created: 2015-11-24 Last updated: 2025-01-31Bibliographically approved
Konn, C., Charlou, J. L., Holm, N. G. & Mousis, O. (2015). The Production of Methane, Hydrogen, and Organic Compounds in Ultramafic-Hosted Hydrothermal Vents of the Mid-Atlantic Ridge. Astrobiology, 15(5), 381-399
Open this publication in new window or tab >>The Production of Methane, Hydrogen, and Organic Compounds in Ultramafic-Hosted Hydrothermal Vents of the Mid-Atlantic Ridge
2015 (English)In: Astrobiology, ISSN 1531-1074, E-ISSN 1557-8070, Vol. 15, no 5, p. 381-399Article, review/survey (Refereed) Published
Abstract [en]

Both hydrogen and methane are consistently discharged in large quantities in hydrothermal fluids issued from ultramafic-hosted hydrothermal fields discovered along the Mid-Atlantic Ridge. Considering the vast number of these fields discovered or inferred, hydrothermal fluxes represent a significant input of H-2 and CH4 to the ocean. Although there are lines of evidence of their abiogenic formation from stable C and H isotope results, laboratory experiments, and thermodynamic data, neither their origin nor the reaction pathways generating these gases have been fully constrained yet. Organic compounds detected in the fluids may also be derived from abiotic reactions. Although thermodynamics are favorable and extensive experimental work has been done on Fischer-Tropsch-type reactions, for instance, nothing is clear yet about their origin and formation mechanism from actual data. Since chemolithotrophic microbial communities commonly colonize hydrothermal vents, biogenic and thermogenic processes are likely to contribute to the production of H-2, CH4, and other organic compounds. There seems to be a consensus toward a mixed origin (both sources and processes) that is consistent with the ambiguous nature of the isotopic data. But the question that remains is, to what proportions? More systematic experiments as well as integrated geochemical approaches are needed to disentangle hydrothermal geochemistry. This understanding is of prime importance considering the implications of hydrothermal H-2, CH4, and organic compounds for the ocean global budget, global cycles, and the origin of life.

National Category
Physical Sciences Biological Sciences Earth and Related Environmental Sciences
Identifiers
urn:nbn:se:su:diva-118280 (URN)10.1089/ast.2014.1198 (DOI)000354612400006 ()
Available from: 2015-06-22 Created: 2015-06-15 Last updated: 2025-01-31Bibliographically approved
Holm, N. G. (2014). Glasses as sources of condensed phosphates on the early earth. Geochemical Transactions, 15, 8
Open this publication in new window or tab >>Glasses as sources of condensed phosphates on the early earth
2014 (English)In: Geochemical Transactions, E-ISSN 1467-4866, Vol. 15, p. 8-Article, review/survey (Refereed) Published
Abstract [en]

Procedures for the analysis of phosphorus in geological material normally aims for the determination of the total amount of P expressed as orthophosphate (PO43-) or the differentiation between inorganic and organic P. This is probably due to analytical difficulties but also to the prevalent opinion that the chemistry of phosphorus in geological environments is almost entirely restricted to the mineral apatite. Because of the low solubility of apatite it is, therefore, commonly argued that little P was around for prebiotic chemistry and that pre-biological processes would essentially have had to do without this indispensable element unless it was provided by alternative sources or mechanisms (such as reduction and activation by lightning or delivery to Earth by celestial bodies). It is a paradox that the potential existence of reactive phosphorus compounds, such as the mineral schreibersite - iron phosphide, in geological material on Earth is seldom considered although we are aware of the existence of such compounds in meteorite material. The content of Al2O3 in rocks appears to be important for the speciation of phosphorus and for how strongly it binds to silicates. In general, low alumina seems to promote the existence of isolated charge-balanced phosphorus complexes.

Keywords
Condensed phosphates, Pyrophosphate, Trimetaphosphate, Early Earth, Archean, Hadean, Ultramafic glass, Basaltic glass, Komatiite, Oceanic basement
National Category
Geology
Identifiers
urn:nbn:se:su:diva-106344 (URN)10.1186/1467-4866-15-8 (DOI)000338240400001 ()
Note

AuthorCount:1;

Available from: 2014-08-08 Created: 2014-08-04 Last updated: 2023-12-21Bibliographically approved
Neubeck, A., Duc, N. T., Hellevang, H., Oze, C., Bastviken, D., Bacsik, Z. & Holm, N. G. (2014). Olivine alteration and H-2 production in carbonate-rich, low temperature aqueous environments. Planetary and Space Science, 96, 51-61
Open this publication in new window or tab >>Olivine alteration and H-2 production in carbonate-rich, low temperature aqueous environments
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2014 (English)In: Planetary and Space Science, ISSN 0032-0633, E-ISSN 1873-5088, Vol. 96, p. 51-61Article in journal (Refereed) Published
Abstract [en]

Hydrous alteration of olivine is capable of producing molecular hydrogen (H-2) under a wide variety of hydrothermal conditions. Although olivine hydrolysis (i.e., serpentinization) has commonly been assessed at elevated temperatures ( > 100 degrees C), the nature of these reactions in relation to H-2 production at lower temperatures has not been systematically evaluated, especially with regard to carbonate-rich fluids. Specifically, carbonate formation may kinetically infringe on geochemical routes related to serpentinization and H-2 production at lower temperatures. Here time-dependent interactions of solid, liquid, and gaseous phases with respect to olivine hydrolysis in a carbonate-rich solution (20 mM HCO3-) at 30, 50 and 70 degrees C for 315 days is investigated experimentally. Within the first two months, amorphous Si-rich (i.e., talc-like) and carbonate phases precipitated; however, no inhibition of olivine dissolution is observed at any temperature based on surface chemistry analyses. High-resolution surface analyses confirm that precipitates grew as spheroids or vertically to form topographic highs allowing further dissolution of the free olivine surfaces and exposing potential catalysts. Despite no magnetite (Fe3O4) being detected, H-2 increased with time in experiments carried out at 70 degrees C, indicating an alternative coupled route for Fe oxidation and H-2 production. Spectrophotometry analyses show that aqueous Fe(II) is largely converted to Fe(III) potentially integrating into other phases such as serpentine and talc, thus providing a viable pathway for H-2 production. No increase in H-2 production was observed in experiments carried out at 30 and 50 degrees C supporting observations that incorporation of Fe(II) into carbonates occurred faster than the intertwined processes of olivine hydrolysis and Fe(III) oxidation. Overall, carbonate formation is confirmed to be a major influence related to H-2 production in low-temperature serpentinization systems.

Keywords
Olivine, Hydrogen, Serpentinization, Deep biosphere, Early Earth, Habitability
National Category
Geology
Identifiers
urn:nbn:se:su:diva-105901 (URN)10.1016/j.pss.2014.02.014 (DOI)000336824600005 ()
Funder
Swedish Research Council, 621-2008-2712
Note

AuthorCount:7;

Available from: 2014-07-09 Created: 2014-07-08 Last updated: 2022-03-23Bibliographically approved
de Souza, C. M. D., Carneiro, C. E. A., Bau, J. P., da Costa, A. C. S., Ivashita, F. F., Paesano, A. J., . . . Zaia, D. A. M. (2013). Interaction of forsterite-91 with distilled water and artificial seawater: a prebiotic chemistry experiment. International Journal of Astrobiology, 12(2), 135-143
Open this publication in new window or tab >>Interaction of forsterite-91 with distilled water and artificial seawater: a prebiotic chemistry experiment
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2013 (English)In: International Journal of Astrobiology, ISSN 1473-5504, E-ISSN 1475-3006, Vol. 12, no 2, p. 135-143Article in journal (Refereed) Published
Abstract [en]

In the present work, the interactions between forsterite-91 with distilled water and forsterite-91 with artificial seawater were studied at two pHs (2.0 and 8.0) using different techniques. A large increase in pH was observed for samples incubated at an initially acidic pH (2.0) due to the dissolution of forsterite-91 in distilled water and artificial seawater. Thus, in acidic hydrothermal vents, an increase in the amount of hydrocarbons and magnetite should be expected due to the release of Fe(II). The pH(PZC) decreased and the pH(IEP) increased when forsterite-91 was treated with distilled water and artificial seawater. The ions from the artificial seawater had an effect on zeta potential. Scanning electron microscopy (SEM) images and X-ray diffractograms showed halite in the samples of forsterite-91 mixed with artificial seawater. The presence of halite or adsorption of ions on the surface of forsterite-91 could affect the synthesis of magnetite and hydrocarbons in hydrothermal vents, due to a decrease in the dissolution rates of forsterite-91. The dissolution of forsterite-91 yields low concentrations of Fe(III) and Mn(II) as detected by electron paramagnetic resonance (EPR) spectroscopy. Microanalysis of forsterite-91 showed a higher amount of Mn, with an oxidation that was likely not + II, as Mn in supernatant solutions was only detected by EPR spectroscopy after mixing with artificial seawater at pH 2.0. As Fe(III) and Mn(II) are catalyst constituents of magnetite and manganese oxide, respectively, their presence is important for synthesis in hydrothermal vents. Etch pits were observed only in the forsterite-91 sample mixed with distilled water at pH 8.0. Na, Cl, S, Ca and K were detected in the samples mixed with artificial seawater by SEM-EDS. Si, Mg, Fe and Al were detected in almost all supernatant samples due to forsterite-91 dissolution. Cr was not dissolved in the experiments, thus Cr in the mineral could serve as an effective catalyst for Fischer Tropsch Types (FTT) reactions in hydrothermal vent systems. X-ray diffractograms of the original forsterite-91 also showed peaks arising from zeolites and clinochlore. After the samples were treated with artificial seawater, X-ray diffractograms showed the dissolution of zeolite. Experiments should be performed in the natural environment to verify the potential for zeolites to act as a catalyst in hydrothermal vents.

Keywords
forsterite-91, olivine, prebiotic chemistry, seawater
National Category
Astronomy, Astrophysics and Cosmology Geosciences, Multidisciplinary
Identifiers
urn:nbn:se:su:diva-90000 (URN)10.1017/S147355041200050X (DOI)000317525900004 ()
Note

AuthorCount:12;

Available from: 2013-05-20 Created: 2013-05-20 Last updated: 2022-02-24Bibliographically approved
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