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Evaluation of unsupervised learning algorithms for the classification of behavior from pose estimation data
Stockholms universitet, Naturvetenskapliga fakulteten, Institutionen för biokemi och biofysik. Stockholms universitet, Science for Life Laboratory (SciLifeLab).
Stockholms universitet, Naturvetenskapliga fakulteten, Institutionen för biokemi och biofysik. Stockholms universitet, Science for Life Laboratory (SciLifeLab).
Stockholms universitet, Naturvetenskapliga fakulteten, Institutionen för biokemi och biofysik. Stockholms universitet, Science for Life Laboratory (SciLifeLab).
Stockholms universitet, Naturvetenskapliga fakulteten, Institutionen för biokemi och biofysik. Stockholms universitet, Science for Life Laboratory (SciLifeLab).ORCID-id: 0000-0002-8902-3238
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Rekke forfattare: 52025 (engelsk)Inngår i: Patterns, E-ISSN 2666-3899, Vol. 6, nr 5, artikkel-id 101237Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Analyzing animal behavior is crucial for decoding brain function, modeling neurological disorders, and assessing therapeutics. Recent advances in pose-estimation tools like DeepLabCut and SLEAP have revolutionized behavioral analysis by enabling precise tracking of animal body movements. However, these tools do not automate behavioral classification. Unsupervised learning algorithms address this gap by identifying clusters of recurring behavioral motifs from pose-tracking data without requiring pre-labeled datasets, reducing observer bias and uncovering novel patterns. This study compares four recent unsupervised learning algorithms—B-SOiD, BFA, VAME, and Keypoint-MoSeq—analyzing their methodological approaches, clustering efficiency, and ability to produce meaningful behavioral classifications. By offering a qualitative and quantitative evaluation, this paper aims to aid researchers in selecting the most suitable tool for their specific research needs.

sted, utgiver, år, opplag, sider
2025. Vol. 6, nr 5, artikkel-id 101237
Emneord [en]
behavioral classification, neuroethology, neuroscience, unsupervised learning
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Identifikatorer
URN: urn:nbn:se:su:diva-243064DOI: 10.1016/j.patter.2025.101237ISI: 001493722000005Scopus ID: 2-s2.0-105003103402OAI: oai:DiVA.org:su-243064DiVA, id: diva2:1957310
Tilgjengelig fra: 2025-05-09 Laget: 2025-05-09 Sist oppdatert: 2025-09-18bibliografisk kontrollert

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Mlost, JakubCosta, Ana RitaPollak Dorocic, Iskra

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