Ändra sökning
RefereraExporteraLänk till posten
Permanent länk

Direktlänk
Referera
Referensformat
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Annat format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annat språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf
The augmented value of using clinical notes in semi-automated surveillance of deep surgical site infections after colorectal surgery
University Medical Centre Utrecht, Utrecht, the Netherlands; National Institute for Public Health and the Environment, Bilthoven, the Netherlands.
Karolinska Institutet, Stockholm, Sweden; Karolinska University Hospital, Stockholm.ORCID-id: 0000-0001-7162-3844
Stockholms universitet, Samhällsvetenskapliga fakulteten, Institutionen för data- och systemvetenskap.
Stockholms universitet, Samhällsvetenskapliga fakulteten, Institutionen för data- och systemvetenskap.ORCID-id: 0000-0001-9731-1048
Visa övriga samt affilieringar
Antal upphovsmän: 82023 (Engelska)Ingår i: Antimicrobial Resistance and Infection Control, E-ISSN 2047-2994, Vol. 12, nr 1, artikel-id 117Artikel i tidskrift (Refereegranskat) Published
Abstract [en]

BackgroundIn patients who underwent colorectal surgery, an existing semi-automated surveillance algorithm based on structured data achieves high sensitivity in detecting deep surgical site infections (SSI), however, generates a significant number of false positives. The inclusion of unstructured, clinical narratives to the algorithm may decrease the number of patients requiring manual chart review. The aim of this study was to investigate the performance of this semi-automated surveillance algorithm augmented with a natural language processing (NLP) component to improve positive predictive value (PPV) and thus workload reduction (WR).MethodsRetrospective, observational cohort study in patients who underwent colorectal surgery from January 1, 2015, through September 30, 2020. NLP was used to detect keyword counts in clinical notes. Several NLP-algorithms were developed with different count input types and classifiers, and added as component to the original semi-automated algorithm. Traditional manual surveillance was compared with the NLP-augmented surveillance algorithms and sensitivity, specificity, PPV and WR were calculated.ResultsFrom the NLP-augmented models, the decision tree models with discretized counts or binary counts had the best performance (sensitivity 95.1% (95%CI 83.5-99.4%), WR 60.9%) and improved PPV and WR by only 2.6% and 3.6%, respectively, compared to the original algorithm.ConclusionsThe addition of an NLP component to the existing algorithm had modest effect on WR (decrease of 1.4-12.5%), at the cost of sensitivity. For future implementation it will be a trade-off between optimal case-finding techniques versus practical considerations such as acceptability and availability of resources.

Ort, förlag, år, upplaga, sidor
2023. Vol. 12, nr 1, artikel-id 117
Nyckelord [en]
Automated surveillance, Algorithm, Colorectal surgery, Healthcare-associated infections, Natural language processing, Surgical site infections
Nationell ämneskategori
Hälsovetenskaper Biologiska vetenskaper Medicinska och farmaceutiska grundvetenskaper Infektionsmedicin
Forskningsämne
data- och systemvetenskap
Identifikatorer
URN: urn:nbn:se:su:diva-223746DOI: 10.1186/s13756-023-01316-xISI: 001088059900001PubMedID: 37884948Scopus ID: 2-s2.0-85174855329OAI: oai:DiVA.org:su-223746DiVA, id: diva2:1812789
Tillgänglig från: 2023-11-17 Skapad: 2023-11-17 Senast uppdaterad: 2023-11-23Bibliografiskt granskad

Open Access i DiVA

Fulltext saknas i DiVA

Övriga länkar

Förlagets fulltextPubMedScopus

Person

Weegar, RebeckaHenriksson, Aron

Sök vidare i DiVA

Av författaren/redaktören
van der Werff, Suzanne D.Weegar, RebeckaHenriksson, Aron
Av organisationen
Institutionen för data- och systemvetenskap
I samma tidskrift
Antimicrobial Resistance and Infection Control
HälsovetenskaperBiologiska vetenskaperMedicinska och farmaceutiska grundvetenskaperInfektionsmedicin

Sök vidare utanför DiVA

GoogleGoogle Scholar

doi
pubmed
urn-nbn

Altmetricpoäng

doi
pubmed
urn-nbn
Totalt: 59 träffar
RefereraExporteraLänk till posten
Permanent länk

Direktlänk
Referera
Referensformat
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Annat format
Fler format
Språk
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Annat språk
Fler språk
Utmatningsformat
  • html
  • text
  • asciidoc
  • rtf