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Isomers of ions in space and planetary atmospheres: Experimental and theoretical studies
Stockholm University, Faculty of Science, Department of Physics.ORCID iD: 0000-0002-9501-4434
2025 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

The list of detected molecules in space has grown rapidly in recent years. Identified compounds now include both nitrogen and oxygen bearing species and detection is being made in a variety of different regions. Isomers have also become increasingly interesting, as their interconversion often is hindered by an energy barrier unlikely to be overcome given the energy-scarce conditions in space, they readily act as different species. In order to describe the chemical environments in space, model calculations are being performed, heavily relying on detailed knowledge about the abundances and reactivity of these species. However, the abundances and formation pathways of many compounds still remain largely unknown.

This thesis presents two experimental studies: i) the possible selective generation of the [CH3N]+ isomers and their reactivity with hydrocarbons methane, ethene, ethyne, propene, propadiene and propyne and the alcohol methanol, and ii) the infrared-predissociation spectroscopy of the [CH3N]+ and [C3H3]+ isomers (and the deuterated isotopologues of the latter). Both isomeric pairs have been proposed to exist on Titan as well as to act as key intermediates in the synthesis of heavier compounds, potentially including aerosols, tholins and amino acids. Theoretical calculations accompanies the above experiments, presenting potential energy surfaces of the reactions and predicted vibrational band positions. 

The results show that the reactions of [CH3N]+ isomers with the hydrocarbons and the alcohol do lead to heavier compounds in exoergic pathways feasible to occur in space and on Titan. Products identified by our calculations includes protonated acrylonitrile, hydrogen cyanide and protonated pyrrole. The reactivity is also isomer dependent, highlighting the importance of isomer consideration in computational modeling of chemical networks in space. The obtained IRPD spectrum allows for identification of these species and pave the way for detection of them with infrared telescopes in space.

Place, publisher, year, edition, pages
Stockholm: Department of Physics, Stockholm University , 2025. , p. 123
Keywords [en]
astrochemistry, ions, isomers, Titan
National Category
Atom and Molecular Physics and Optics
Research subject
Chemical Physics
Identifiers
URN: urn:nbn:se:su:diva-241696ISBN: 978-91-8107-204-4 (print)ISBN: 978-91-8107-205-1 (electronic)OAI: oai:DiVA.org:su-241696DiVA, id: diva2:1949502
Public defence
2025-05-27, FB51, AlbaNova, Roslagstullsbacken 21, and online via Zoom, public link is available at the department website, Stockholm, 14:00 (English)
Opponent
Supervisors
Available from: 2025-05-05 Created: 2025-04-02 Last updated: 2025-04-15Bibliographically approved
List of papers
1. The reactivity of methanimine radical cation (H2CNH.+) and its isomer aminomethylene (HCNH2.+) with methane
Open this publication in new window or tab >>The reactivity of methanimine radical cation (H2CNH.+) and its isomer aminomethylene (HCNH2.+) with methane
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2021 (English)In: Chemical Physics Letters, ISSN 0009-2614, E-ISSN 1873-4448, Vol. 775, article id 138611Article in journal (Refereed) Published
Abstract [en]

Experimental and theoretical studies are presented on the reactions of the isomeric radical cations H2CNH+ and HCNH2+ with CH4. Ionic isomers were generated selectively by VUV dissociative photoionization of azetidine and cyclopropylamine precursors respectively. Both exclusively give H2CNH2+ plus CH3 as products, but differences are observed related to a competition between stripping and complex-mediated H-transfer. Astrochemical implications for Titan’s atmosphere are briefly discussed, where the presence of methanimine (H2CNH), a key prebiotic molecule and a potential precursor for tholins, is proposed on the basis of atmospheric models and the observation of CH2NH2+ ions in Cassini mass spectrometric data.

Keywords
Interstellar medium, Rate constants, Ion-molecule reactions, Astrochemistry, Molecular astrophysics, Titan's atmosphere, Methane activation, Isomer, Methanimine, Aminomethylene
National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-195709 (URN)10.1016/j.cplett.2021.138611 (DOI)000656477200002 ()2-s2.0-85104947990 (Scopus ID)
Funder
Swedish Research Council, 2019-04332
Available from: 2021-08-25 Created: 2021-08-25 Last updated: 2025-04-02Bibliographically approved
2. The reactivity of methanimine radical cation (H2CNH•+) and its isomer aminomethylene (HCNH2•+) with C2H4
Open this publication in new window or tab >>The reactivity of methanimine radical cation (H2CNH•+) and its isomer aminomethylene (HCNH2•+) with C2H4
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2021 (English)In: Chemical Physics Letters, ISSN 0009-2614, E-ISSN 1873-4448, Vol. 777, article id 138677Article in journal (Refereed) Published
Abstract [en]

Experimental and theoretical studies are presented on the reactivity of H2CNH'+ (methanimine) and HCNH2'+ (aminomethylene) with ethene (C2H4). Selective isomer generation is performed via dissociative photoionization of suitable neutral precursors and reactive cross sections and branching ratios are measured as a function of photon and collision energies. Differences between isomers' reactivity are discussed in light of ab-initio calculations on reaction mechanisms. The main products, for both isomers, are H-elimination, most likely occurring from covalently bound adducts (giving c-CH2CH2CHNH+/CH2NHCHCH2+) and H' atom transfer to yield H2CNH2+. The astrochemical implications of the results are briefly addressed.

Keywords
Interstellar medium, Rate constant, Astrochemistry molecular astrophysics, Isomerism, Protonated ketenimine, Ion-molecule reactions, Titan's atmosphere
National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-195958 (URN)10.1016/j.cplett.2021.138677 (DOI)000662693000004 ()2-s2.0-85106251513 (Scopus ID)
Funder
Swedish Research Council, 2019-04332
Available from: 2021-08-30 Created: 2021-08-30 Last updated: 2025-04-02Bibliographically approved
3. Experimental and Computational Studies on the Reactivity of Methanimine Radical Cation (H2CNH+•) and its Isomer Aminomethylene (HCNH2+•) With C2H2
Open this publication in new window or tab >>Experimental and Computational Studies on the Reactivity of Methanimine Radical Cation (H2CNH+•) and its Isomer Aminomethylene (HCNH2+•) With C2H2
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2021 (English)In: Frontiers in Astronomy and Space Sciences, E-ISSN 2296-987X, Vol. 8, article id 752376Article in journal (Refereed) Published
Abstract [en]

Experimental and theoretical studies are presented on the reactivity of the radical cation isomers H2CNH+• (methanimine) and HCNH2+• (aminomethylene) with ethyne (C2H2). Selective isomer generation is performed via dissociative photoionization of suitable neutral precursors as well as via direct photoionization of methanimine. Reactive cross sections (in absolute scales) and product branching ratios are measured as a function of photon and collision energies. Differences between isomers’ reactivity are discussed in light of ab-initio calculations of reaction mechanisms. The major channels, for both isomers, are due to H atom elimination from covalently bound adducts to give [C3NH4]+. Theoretical calculations show that while for the reaction of HCNH2+• with acetylene any of the three lowest energy [C3NH4]+ isomers can form via barrierless and exothermic pathways, for the H2CNH+• reagent the only barrierless pathway is the one leading to the production of protonated vinyl cyanide (CH2CHCNH+), a prototypical branched nitrile species that has been proposed as a likely intermediate in star forming regions and in the atmosphere of Titan. The astrochemical implications of the results are briefly addressed.

Keywords
methylene imine, acrylonitrile, vinyl cyanide, rate constant, cross sections, Titan, ISM, ion-molecule reactions
National Category
Physical Sciences
Identifiers
urn:nbn:se:su:diva-201888 (URN)10.3389/fspas.2021.752376 (DOI)000749439200001 ()
Available from: 2022-02-10 Created: 2022-02-10 Last updated: 2025-04-02Bibliographically approved
4. Spectroscopic characterisation of the isomeric H2NCH+ and H2CNH+ radical cations
Open this publication in new window or tab >>Spectroscopic characterisation of the isomeric H2NCH+ and H2CNH+ radical cations
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2022 (English)In: Journal of Molecular Spectroscopy, ISSN 0022-2852, E-ISSN 1096-083X, Vol. 387, article id 111640Article in journal (Refereed) Published
Abstract [en]

The vibrational transitions and the relative abundances of the two isomeric ions H2CNH+ and H2NCH+ generated through electron impact ionisation have been investigated in a noble gas tagging experiment. It could be shown that both species were formed with an abundance of 70 and 30% for H2NCH+ and H2CNH+, respectively. The obtained vibrational bands of the two species have been assigned to vibrational transitions through comparison with the results of ab initio calculations. These computations also predict both species to be moderately polar. The present investigations show that both isomers should be included in chemical model calculations of dark interstellar clouds, protoplanetary disks, star-forming regions as well as planetary atmospheres.

Keywords
Astrochemistry, Molecular ions, Cryogenic ion trap, Titan, Vibrational spectra
National Category
Astronomy, Astrophysics and Cosmology Physical Chemistry
Identifiers
urn:nbn:se:su:diva-207948 (URN)10.1016/j.jms.2022.111640 (DOI)000827553200001 ()2-s2.0-85133462106 (Scopus ID)
Funder
German Research Foundation (DFG), 871124German Research Foundation (DFG), SCHL 341/15–1Swedish Research Council, 2019-04332EU, Horizon 2020
Available from: 2022-08-19 Created: 2022-08-19 Last updated: 2025-04-29Bibliographically approved
5. Combined experimental and computational study of the reactivity of the methanimine radical cation (H2CNH˙+) and its isomer aminomethylene (HCNH2˙+) with propene (CH3CHCH2)
Open this publication in new window or tab >>Combined experimental and computational study of the reactivity of the methanimine radical cation (H2CNH˙+) and its isomer aminomethylene (HCNH2˙+) with propene (CH3CHCH2)
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2024 (English)In: Physical Chemistry, Chemical Physics - PCCP, ISSN 1463-9076, E-ISSN 1463-9084, Vol. 26, no 35, p. 22990-23002Article in journal (Refereed) Published
Abstract [en]

The gas phase reactivity of the radical cation isomers H2CNH˙+ (methanimine) and HCNH2˙+ (aminomethylene) with propene (CH3CHCH2) has been investigated by measuring absolute reactive cross sections and product branching ratios, under single collision conditions, as a function of collision energy (in the range ∼0.07–11.80 eV) using guided ion beam mass spectrometry coupled with VUV photoionization for selective isomer generation. Experimental results have been merged with theoretical calculations to elucidate reaction pathways and structures of products. The H2CNH˙+ isomer is over a factor two more reactive than HCNH2˙+. A major channel from both isomers is production of protonated methanimine CH2NH2+via hydrogen-atom transfer reaction but, while H2CNH˙+ additionally gives charge and proton transfer products, the HCNH2˙+ isomer leads instead to protonated vinylimine CH2CHCHNH2+, produced alongside CH3˙ radicals. The reactions have astrochemical implications in the build up of chemical complexity in both the interstellar medium and the hydrocarbon-rich atmospheres of planets and satellites.

National Category
Physical Chemistry
Identifiers
urn:nbn:se:su:diva-238172 (URN)10.1039/d4cp02002b (DOI)001296108800001 ()39171672 (PubMedID)2-s2.0-85201871658 (Scopus ID)
Available from: 2025-02-03 Created: 2025-02-03 Last updated: 2025-04-02Bibliographically approved
6. Laboratory gas-phase vibrational spectra of [C3H3]+ isomers and isotopologues by IRPD spectroscopy
Open this publication in new window or tab >>Laboratory gas-phase vibrational spectra of [C3H3]+ isomers and isotopologues by IRPD spectroscopy
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2020 (English)In: Journal of Molecular Spectroscopy, ISSN 0022-2852, E-ISSN 1096-083X, Vol. 374, article id 111377Article in journal (Refereed) Published
Abstract [en]

Gas phase vibrational spectra of [C3H3]+ isomers and their fully deuterated isotopologues measured in a cryogenic 22-pole ion trap are presented. The widely tunable free electron laser for infrared experiments, FELIX, was employed to cover the frequency range 500–2400 cm−1, complemented with an OPO/OPA system covering 2800–3400 cm−1. Spectral assignments for both the linear and cyclic isomeric form (H2C3H+ and c-C3H3+, respectively) are made based on various high-level computational studies. The effect of ion source conditions and different precursors (allene and propargyl chloride) for the preferential production of a specific isomer is discussed. The perturbation of the vibrational band position due to complexation with neon in the recorded infrared-predissociation (IRPD) spectra are also reported in this study.

Keywords
Astrochemistry, Molecular ions, Cryogenic ion trap, Titan, Vibrational spectra
National Category
Physical Sciences
Identifiers
urn:nbn:se:su:diva-191643 (URN)10.1016/j.jms.2020.111377 (DOI)000605622300001 ()
Available from: 2021-03-30 Created: 2021-03-30 Last updated: 2025-04-02Bibliographically approved
7. A Combined Experimental and Computational Study of the [CH3N]+ + CH2CCH2 Reaction: A Potential Source of Astrochemical Pyrrole.
Open this publication in new window or tab >>A Combined Experimental and Computational Study of the [CH3N]+ + CH2CCH2 Reaction: A Potential Source of Astrochemical Pyrrole.
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(English)Manuscript (preprint) (Other academic)
National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-241658 (URN)
Available from: 2025-04-02 Created: 2025-04-02 Last updated: 2025-04-02
8. A Combined Experimental and Computational Study of the [CH3N]+ + CH3CCH Reaction.
Open this publication in new window or tab >>A Combined Experimental and Computational Study of the [CH3N]+ + CH3CCH Reaction.
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(English)Manuscript (preprint) (Other academic)
National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-241659 (URN)
Available from: 2025-04-02 Created: 2025-04-02 Last updated: 2025-04-02
9. A Combined Experimental and Computational Study of the [CH3N]+ + CH3OH Reaction.
Open this publication in new window or tab >>A Combined Experimental and Computational Study of the [CH3N]+ + CH3OH Reaction.
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(English)Manuscript (preprint) (Other academic)
National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:su:diva-241660 (URN)
Available from: 2025-04-02 Created: 2025-04-02 Last updated: 2025-04-02

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1415161718192017 of 39
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