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Medical Image Tagging by Deep Learning and Retrieval
Stockholm University, Faculty of Social Sciences, Department of Computer and Systems Sciences. Athens University of Economics and Business, Greece.
Stockholm University, Faculty of Social Sciences, Department of Computer and Systems Sciences.
2020 (English)In: Experimental IR Meets Multilinguality, Multimodality, and Interaction: 11th International Conference of the CLEF Association, CLEF 2020, Thessaloniki, Greece, September 22–25, 2020, Proceedings / [ed] Avi Arampatzis, Evangelos Kanoulas, Theodora Tsikrika, Stefanos Vrochidis, Hideo Joho, Christina Lioma, Carsten Eickhoff, Aurélie Névéol, Linda Cappellato, Nicola Ferro, Springer, 2020, p. 154-166Conference paper, Published paper (Refereed)
Abstract [en]

Radiologists and other qualified physicians need to examine and interpret large numbers of medical images daily. Systems that would help them spot and report abnormalities in medical images could speed up diagnostic workflows. Systems that would help exploit past diagnoses made by highly skilled physicians could also benefit their more junior colleagues. A task that systems can perform towards this end is medical image classification, which assigns medical concepts to images. This task, called Concept Detection, was part of the ImageCLEF 2019 competition. We describe the methods we implemented and submitted to the Concept Detection 2019 task, where we achieved the best performance with a deep learning method we call ConceptCXN. We also show that retrieval-based methods can perform very well in this task, when combined with deep learning image encoders. Finally, we report additional post-competition experiments we performed to shed more light on the performance of our best systems. Our systems can be installed through PyPi as part of the BioCaption package.

Place, publisher, year, edition, pages
Springer, 2020. p. 154-166
Series
Lecture Notes in Computer Science, ISSN 0302-9743, E-ISSN 1611-3349 ; 12260
Keywords [en]
Medical image, image tagging, image classification
National Category
Computer Sciences
Research subject
Computer and Systems Sciences
Identifiers
URN: urn:nbn:se:su:diva-188951DOI: 10.1007/978-3-030-58219-7_14ISBN: 978-3-030-58218-0 (print)ISBN: 978-3-030-58219-7 (electronic)OAI: oai:DiVA.org:su-188951DiVA, id: diva2:1517652
Conference
International Conference of the Cross-Language Evaluation Forum for European Languages, Thessaloniki, Greece, September 22–25, 2020
Available from: 2021-01-14 Created: 2021-01-14 Last updated: 2022-02-25Bibliographically approved

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Kougia, VasilikiPavlopoulos, John

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